Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02715 ATGCTCAAACTCCTCAACAAGAACCTCCGTCGCCTCAGCTCCCACCTCCGCTGGCCACCACGGCGTCGTTCCAAGTGCAAGCTACGCTTCACCAAGCCCACTCCCAAACCTCACACCGAACCAACCAGCTCCACCACCGAACCTCCTTCTCCCAAACCCAAACCTATACGAATCGCAACGTTCAACGCTGCATTCTTCTCCATGGCACCGGTGCTGCTTCCCGAAACAGACGACAAAACCGCGACCACCTCAGACGACAACAACAACAACAACGTGGGACGAGATCGACCACGAAGCATTCTGAAACAGTCGCAGTCTCCGCTGCTGGGCAACAAGTCAAAGCTGAGAGTGTCCATCAACTTACCCGACAACGAGATTTCGCTGCGCCAAACGAGCTTCTCCGAACACGAGAGATCAAAAAGCTCGTTGTCATGGTCGTGGAGTTTGGGCGAGGGAATGGAGGGAGGAGGAAAAGAGAGGCAGAGAAAAACGGTGGTTGAAGTCCTGAGAGAGCTAAACGCCGACGTTTTGGGCTTGCAAGACGTGAAGGCGGAGGAAGAGAACGGGATGAAGCCTCTGTCGGATTTGGCTCGCGCTCTGGGAATGAACTACGTCTTCGCCGAAAGCTGGGCTCCTCAATACGGCAACGCCGTTTTGTCTAAGTGGCCCATTAAACGCTGGAAGCTACAGAAAATCTTTGACCACACCGATTACAGGAATGTTCTGAAGGCCACCATCGATGTACCCCAAGAAGGTGAACTCCACTTTTACTGCACCCACCTTGATCATCTTGATGAGAATTGGAGAATGAAGCAGATAAATGCAATAATTCAATCTAATGATGAGCCACACATTTTAGCTGGAGGTCTTAATTCGCTTGATGAATCAGATTATTCCCAAGAAAGATGGATAGATATTGTAAAGTACTACGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGCAGACACTACACGGATGCTAAGGACTTTTCAGGGGAATGTGAGTCTGTTGTCATGATTGCCAAAGGACAAAGTGTACAAGGAACATGTAAGTATGGAACTCGGGTAGATTACATATTGTCTTCCTCAGATTCTCCATATAAATTCGTTTCTGGATCCTACTTAGTCCTTTCTTCCAAAGGGACTTCAGATCATCACATAGTGAAAGTTGATGTGGTAAAAGTAAATAGTAATCCTCAAGAAAATCTGACAAAGAAGCAGGGACAACCAAGACAGAAAGTTGTAAGAATAAAATCAAGTGCATCGAAATGTATATGGAAAACACACACTGGAGATACAGATTGA 1326 0.4698 MLKLLNKNLRRLSSHLRWPPRRRSKCKLRFTKPTPKPHTEPTSSTTEPPSPKPKPIRIATFNAAFFSMAPVLLPETDDKTATTSDDNNNNNVGRDRPRSILKQSQSPLLGNKSKLRVSINLPDNEISLRQTSFSEHERSKSSLSWSWSLGEGMEGGGKERQRKTVVEVLRELNADVLGLQDVKAEEENGMKPLSDLARALGMNYVFAESWAPQYGNAVLSKWPIKRWKLQKIFDHTDYRNVLKATIDVPQEGELHFYCTHLDHLDENWRMKQINAIIQSNDEPHILAGGLNSLDESDYSQERWIDIVKYYEEMGKPTPKVEVMKYLKSRHYTDAKDFSGECESVVMIAKGQSVQGTCKYGTRVDYILSSSDSPYKFVSGSYLVLSSKGTSDHHIVKVDVVKVNSNPQENLTKKQGQPRQKVVRIKSSASKCIWKTHTGDTD 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02715 441 FunFam Endonuclease/exonuclease/phosphatase family protein 151 402 - -
Pumo5g02715 441 MobiDBLite consensus disorder prediction 77 113 - -
Pumo5g02715 441 Pfam Endonuclease/Exonuclease/phosphatase family 148 392 IPR005135 GO:0003824
Pumo5g02715 441 MobiDBLite consensus disorder prediction 83 113 - -
Pumo5g02715 441 SUPERFAMILY DNase I-like 52 399 IPR036691 -
Pumo5g02715 441 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 55 415 - -
Pumo5g02715 441 MobiDBLite consensus disorder prediction 15 32 - -
Pumo5g02715 441 MobiDBLite consensus disorder prediction 15 55 - -
Pumo5g02715 441 Gene3D Endonuclease/exonuclease/phosphatase 143 401 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02715 Pumo-Chr5 73749737 73752842 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02715 - - gmx:100820515 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02715 5 73749737 73752842 Pumo5g02715 5 73749737 73752842 ECH
Pumo5g02715 5 73749737 73752842 Pumo3g02299 3 35141479 35145132 PCT