Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02299 ATGCTCAAGCTCCTCAACAAGAACATCCGCCGCCTCCTCCGCCGTCTCCGGTGGCCAATTCGCCGCCGCTCAAAGCCCAAAGTAGTAGTGATCAACAAGCTCGGGAAGAAGGACCCAAAAGCCCAAACCGAAGCAAGCCCAAATTTTTCCGCAACGGTTCACCCCAACGCGCAATTGGGTACTACGAAACCCATTCGGGTGGCGACCTTCAACGCCGCCTTGTTCTCCATGGCACCGGCGCTCCCAAAACCCGCACCCACGTTCGAGGACCAAAACGGCAGTCGCTTCGAACCTGAATTCGCGATCGAAGTCCACGAAGGAGCGTCCCAGAAGCATACTGAAGCAATCGCAATCGCAATCGCAGTCAGTGAACAGAGTAGACGACAACGACAACGTGGGGAGCAGACAAGAAGCAGCGAGGTTGGCGAAATCGAAAATGAGGGTTTCCATAAATTTACCAGACAACGAGATATCGCTGCTGCGAAGCCGACAATCGAGCTTCTCGGAACACGACAAGGAGGGGTGGAAGCCATCCTCGTGGGGGAGTGGGGTCCACAGGTAGACGCTGATGTTTTGGGTCTGCAAGATGTGAAGGCCGAGGAAGAGAATGGGATGAAGCCTTTGTCGGATTTGGCTGCGGCTCTGGGAATGAACTATGTGTTCGCCGAAAGCTGGGCACCTGAGTACGGCAACGCTGTCTTGTCCAAATGGCCCATCAAACGCTGGAACTCTCACAAAATCTTTGATCACTCTGATTTCAGGAATGTTCTGAAGGCCACTATCGATGTACCCCAAGCAGGTGAACTTAACTTCTACTGTACCCACCTTGATCATCTTGATGAGAATTGGCGAATGAAGCAGGTAAATGCAATAATCCAATCTAGTGATGAGCCTCACATCTTAGCTGGAGGCCTTAATTCACTTGATGAATCAGATTACTCCCAAGAAAGATGGACAGATATTGTGAAGTACTATGAAGAGATGGGAAAGCCAACACCAAAGGTTGAAGTGATGAAATATCTCAAGAGTAAAGACTACACTGATGCTAAGGACTATGCAGGGGAATGCGAGTCAGTTGTCATGATTGCCAAGGGCCAAAGTGTCCAGGGAACATGTAAGTATGGAACACGGGTAGATTACATATTATCATCATCAAATTCTCCATACAAGTTTGTTCCCGGTTCCTATTTAGTCCTTTCTTCCAAAGGGACATCAGATCATCACATAGTGAAAGTTGATGTGGTGAAGGCAAATAATAATGCTGAAGAAAATAATAATGTGACAAAGAATCCGCAACAACCGAGACAGAGAATTGTGAGAATAACACAATCCACTCCCTCAAAAGGTATCTGGAAAACACACACTTGA 1368 0.4817 MLKLLNKNIRRLLRRLRWPIRRRSKPKVVVINKLGKKDPKAQTEASPNFSATVHPNAQLGTTKPIRVATFNAALFSMAPALPKPAPTFEDQNGSRFEPEFAIEVHEGASQKHTEAIAIAIAVSEQSRRQRQRGEQTRSSEVGEIENEGFHKFTRQRDIAAAKPTIELLGTRQGGVEAILVGEWGPQVDADVLGLQDVKAEEENGMKPLSDLAAALGMNYVFAESWAPEYGNAVLSKWPIKRWNSHKIFDHSDFRNVLKATIDVPQAGELNFYCTHLDHLDENWRMKQVNAIIQSSDEPHILAGGLNSLDESDYSQERWTDIVKYYEEMGKPTPKVEVMKYLKSKDYTDAKDYAGECESVVMIAKGQSVQGTCKYGTRVDYILSSSNSPYKFVPGSYLVLSSKGTSDHHIVKVDVVKANNNAEENNNVTKNPQQPRQRIVRITQSTPSKGIWKTHT 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02299 455 Pfam Endonuclease/Exonuclease/phosphatase family 180 407 IPR005135 GO:0003824
Pumo3g02299 455 SUPERFAMILY DNase I-like 183 414 IPR036691 -
Pumo3g02299 455 Gene3D Endonuclease/exonuclease/phosphatase 170 418 IPR036691 -
Pumo3g02299 455 PANTHER CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR 47 434 - -
Pumo3g02299 455 FunFam Endonuclease/exonuclease/phosphatase family protein 172 417 - -
Pumo3g02299 455 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02299 Pumo-Chr3 35141479 35145132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02299 - - gmx:100801298 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02299 3 35141479 35145132 Pumo3g02299 3 35141479 35145132 ECH
Pumo5g02715 5 73749737 73752842 Pumo3g02299 3 35141479 35145132 PCT