Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02687 ATGGCATCGAAGCAAGGCGTGAAATCAAGAAGGTTCGGATTGAGTGGCTCGAAAGGCGCGAATTCGCCTTCGTCTTCCACGACATCGTCTTCTAAGCAGTTTCAGGAGACATCGGTTGATGGCCTGAGCTCGCCGGCGTCTTCCTCGGCGAGGAGTAAGCCGCAGCATTTTACTCCAGAAACTGCAGCTGCTGCGCCACCTTTGGATGCGCAGAGAGCGAAGGAAAATGTCACGGTGACGGTCCGATTTCGGCCACTGAATCCAAGGGAAATTCGACAAGGAGAGGAGATTGCTTGGTATGCAGATGGAGAAACTATAGTGCGAAATGAGTATAATCCATCCATAGCATATGCATACGATCGTGTCTTTGGTCCCACAACCACAACTCGTCAGGTCTATGATGTTGCTGCTCAGCACGTTGTTAGTGGTGCTATGGAGGGCGTCAATGGTACGGTATTTGCATATGGGGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCTGGAATCATACCCCTTGCCGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCCAAACCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTGGTTAATGACTTATTAAATCCAGCAGGACAGAACTTAAGAATCAGAGAGGATGCGCAGGGCACCTATGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATTGCAGCTGGAGAAGAACACAGACATGTTGGGTCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAGTGAAGGAGAAGCAGTAACGCTATCACAACTGAATCTCATCGATCTAGCAGGTTCTGAGAGCTCAAAAGCTGAAACAACTGGCATCAGAAGGAGAGAAGGATCTTATATCAATAAAAGTCTTCTAACTCTTGGAACTGTTATTTCAAAATTGACTGAAGATAAAGCTAGTCACATACCTTACAGGGATTCCAAATTGACTAGAGTACTTCAGTCTTCGCTCAGTGGTCATGGACGTGTTTCTCTTATTTGCACAGTAACCCCTTCATCAAGTAGTACTGAAGAGACGCATAATACATTGAAGTTTGCTCACCGGGCAAAGTATATTGAAATACGAGCAGCACAAAACAAGATAATTGATGAGAAGTCACTTATCAAGAAATACCAACAAGAGATTCAATGCTTAAAGGAAGAATTGGAACAATTAAAGAGGGGTATTGTCACTGTTCAACCAAAAGATGCCGGGGATGATGACATTGAGCTCCTAAAACAGAAGCATCACCGTCCACAAGATTTCCTAACAGACCTGGTCACTCGTAGAAGACATTCCTTCGGGGAAGAGGAGCTGGCATACCTTCCTTACAAAAGGCGGGATTTAATCTTAGACGAGGAAAATATTGATTTGTATGTTAATCTGGAGGGAAATGCTGCAACAGCTGATGATTCTTTTAAGGGCGAGAAAAAGATGAAGAAACACGGACTACTAAATTGGTTGAAGTTACGTAAACGAGACAGTGCCTTGACAGGCACAAGTGATAAATCCAGTGGAGCAAAATCTACTAGCACACCTTCTACACCTCAAGCAGAAAGTGGTAATCATGTGGAGTCGAGACTTTCTCATTCTCAACCTGCAGAAAGCTCTCCCTCTGCTGATCTTGCATCAGAGGCAAGAGAGGATAAATATATTCATGAGGATAGTTTATTGGGACAGGAGACTCCTTTGACAAGCATCAAATCAGTTGATCAGATTGATCTTCTGAGGGAGCAGCACAAGATTTTATCTGGAGAAGTGGCACTTCATTCAAGTGCTTTGAAGAGGCTGTCTGACGAAGCAACAAGAAATCCTCAGAATGGTCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTACAGCAAAGAGTGAACAAATAGATTTGCTGGAAAAGCAAATTTCTAATTCTTTCGTTGCTTCAGATAAGACAGAACAGTCAGGAACATTGCAGACTGTTGCTGAGTTGATGGCACAATTAAACGAGAAATCCTTTGAACTTGAGGTCAAAGCAGCCGATAACCGTATAATTCAAGAACAGCTTAATCAGAAGATTTCTGAATGTGAAAGCCAGCAAGAAACGATTGCCTCCCTGAAACAGAAACTTGCAGATGCATTGGAGTTGAGAAATTTCAGCCCTGTAGTCAATCATTCACAAAATTTCTCTGGAACCAAAGACTTTTCTGGTGAACTTCACCTTGACAAGGGGAATGTGACGATAAACAATTCCAATGAAGGGATTCATTTGCAAGCACAGATAAGTGAGATAGAAGAGCTGAAGCAGAGAGTGGCAGAACTAACAGAATCAAAGGAGCAGTTAGAATTTAGAAATCAGAAATTGGCAGAAGAGAGTTCCTATGCTAAAGGGCTTGCTTCAGCTGCTGCTGTTGAGCTTAAGGCACTGTCAGAAGAAGTTGCCAAACTCATGAACCAGAACGAGAGACTAGCTGCTGAGCTAGCTGCATCCAAGAATTCACCCGCTGAACGTAGAACTAGTGGCACAGTCCAAAATGGACGAAGGGAAAGTCATGTTAGGGTCAGACGAAATGATCAGGGTGCATCAAACGCCAATATCAAGAGAGAATTAGCCTTGAGCAAAGAAAGGGAACTTTCATATGAAGCTGCCCTTTTAGAGAAAGATCAGAAAGAGGCCGAACTTCAAAGAAAGATTGAGGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTCCTTGTGGCAAAGCTAAAAAAGTCACAAGGAGCTGAAACTGATGTTTCAGGGTCAACTAGAGAGAGTTCGCAGTTGGATGGTTTTGACGTTTGA 2931 0.4336 MASKQGVKSRRFGLSGSKGANSPSSSTTSSSKQFQETSVDGLSSPASSSARSKPQHFTPETAAAAPPLDAQRAKENVTVTVRFRPLNPREIRQGEEIAWYADGETIVRNEYNPSIAYAYDRVFGPTTTTRQVYDVAAQHVVSGAMEGVNGTVFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENSEGEAVTLSQLNLIDLAGSESSKAETTGIRRREGSYINKSLLTLGTVISKLTEDKASHIPYRDSKLTRVLQSSLSGHGRVSLICTVTPSSSSTEETHNTLKFAHRAKYIEIRAAQNKIIDEKSLIKKYQQEIQCLKEELEQLKRGIVTVQPKDAGDDDIELLKQKHHRPQDFLTDLVTRRRHSFGEEELAYLPYKRRDLILDEENIDLYVNLEGNAATADDSFKGEKKMKKHGLLNWLKLRKRDSALTGTSDKSSGAKSTSTPSTPQAESGNHVESRLSHSQPAESSPSADLASEAREDKYIHEDSLLGQETPLTSIKSVDQIDLLREQHKILSGEVALHSSALKRLSDEATRNPQNGQIHVEMKRLKDEITAKSEQIDLLEKQISNSFVASDKTEQSGTLQTVAELMAQLNEKSFELEVKAADNRIIQEQLNQKISECESQQETIASLKQKLADALELRNFSPVVNHSQNFSGTKDFSGELHLDKGNVTINNSNEGIHLQAQISEIEELKQRVAELTESKEQLEFRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNERLAAELAASKNSPAERRTSGTVQNGRRESHVRVRRNDQGASNANIKRELALSKERELSYEAALLEKDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAETDVSGSTRESSQLDGFDV 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02687 976 SMART kinesin_4 74 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 ProSitePatterns Kinesin motor domain signature. 295 306 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo5g02687 976 Coils Coil 828 862 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 535 575 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 532 581 - -
Pumo5g02687 976 Coils Coil 397 431 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 957 976 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 1 73 - -
Pumo5g02687 976 Pfam Kinesin motor domain 82 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 Coils Coil 909 940 - -
Pumo5g02687 976 PRINTS Kinesin heavy chain signature 345 366 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 PRINTS Kinesin heavy chain signature 261 278 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 PRINTS Kinesin heavy chain signature 296 314 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 PRINTS Kinesin heavy chain signature 147 168 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 PANTHER CENTROMERE PROTEIN E 73 960 IPR027640 GO:0003777|GO:0007018
Pumo5g02687 976 Coils Coil 718 745 - -
Pumo5g02687 976 Coils Coil 650 670 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 15 56 - -
Pumo5g02687 976 Gene3D Kinesin motor domain 67 426 IPR036961 -
Pumo5g02687 976 ProSiteProfiles Kinesin motor domain profile. 76 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g02687 976 Coils Coil 786 820 - -
Pumo5g02687 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 430 IPR027417 -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 871 885 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 955 976 - -
Pumo5g02687 976 CDD KISc_CENP_E 76 395 - -
Pumo5g02687 976 MobiDBLite consensus disorder prediction 856 890 - -
Pumo5g02687 976 FunFam Kinesin-like protein KIN-7G 68 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02687 Pumo-Chr5 73209441 73230954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02687 1 689 Miscellaneous Gene Families AT5G06670 68.050 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02687 K11498 - gmx:100815027 1728.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02687 5 73209441 73230954 Pumo3g02916 3 51753409 51772515 PCT