Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02916 ATGGCAACGAAGCGAAGCGCGAAGTCGAAGGGATTAGGACTGAGAGGTTTCAAAGCTGCGAATTCGCCGTCGTCCTCAACGACGTCGTCTTCCAAGCAGTTTCTAGAAACTTCCGTCGATGGTCTGAGCTCGCCGGCGTCTTCTTCCGCTCGGAGCAAGACGCCGTATTCGTTTTCCGAGAGCGTGCCTTTGGATGCGAAGGAAAACGTGACCGTTACGGTGCGGTTTCGTCCTCTGAATCCCAGGGAAATTCGTCAGGGAGAGGAGATAGCGTGGTATGCTGATGGAGAGACTGTGGTGCGGAACGAGTATAACCCGTCCCTAGCGTATGCTTACGACCGTGTCTTTGGTCCCACAACTACAACTCGGCAGGTCTATGATGTTGCTGCTCAACATATTATTAGTGGTGCTATGGAGGGCATCAATGGTACAATATTTGCATATGGTGTAACAAGCAGTGGGAAGACTCATACAATGCATGGTGATCAAAGATCTCCGGGAATTATACCTCTTGCTGTGAAGGATGCTTTTAGCATTATCCAAGAGACTCTGAACAGAGAGTTTCTTCTTCGAGTTTCGTACTTGGAGATCTACAATGAGGTAGTTAATGACTTATTAAATCCAGCTGGACAAAACTTAAGAATCAGAGAGGATGCACAGGGAACCTTTGTTGAGGGAATAAAGGAAGAGGTTGTACTCTCCCCTGCTCATGCACTGTCCCTTATAGCTGCCGGAGAAGAGCACAGACATGTCGGGTCCACAAATTTCAACCTACTCAGCAGCAGGAGCCATACACTGTTTTCCCTGACTATAGAGAGTAGTCCATGTGGTGAAAATAATGAAGGAGAAGCAGTAACACTGTCTCAACTGAACCTCATCGATCTGGCAGGTTCTGAGAGCTCAAGGGCTGAAACAACTGGCATGAGAAGGCGAGAAGGATCTTACATCAATAAAAGTCTTCTAACTCTTGGAACCGTTATTTCAAAATTGACTGAAGGCAGAGCTAGTCACATACCTTATAGGGACTCCAAATTGACTAGACTACTTCAGTCTTCGCTCAGTGGTCATGGACGTATATCTCTCATTTGCACAGTAACACCTTCATCTAGTAATGCTGAAGAGACACATATTACGTTGAAGTTTGCTCACCGGGCAAAGCACATTGAAATACAAGCAGCCCAGAACACAATAATTGATGAAAAGTCACTTATCAAGAAATACCAACACGACATTCAGTGCTTAAAGGAAGAATTGGAACAAATGAAGCGGGGTATTGTCTCAGTTCAGTCAAAAGAAACTGGTGAAGTTGACTTTGTGCTTCTAAAACAAAAGCTAGAAGATGGTCAAGTCAAGTTGCAATCAAGATTGGAAGAAGAAGAAGAAGCTAAAGCTGCTTTATTAGGAAGAATTCAACGTTTGACCAAGTTAATTTTGGTCTCCACTAAAGCGTCACACACAACTAGATTTTCTAACCGTCCTGGTCCTCGTAGAAGACATTCCTTTGGGGAAGAAGAGTTGGTATACCTTCCATACAAAAGGAGGGATTTAATCTCAGATGACGAAAACACTGATCTGCATGTTAATTTAGAGGGAAATGCTGAAACAGCTGATGATTCTTTTAAGGAGGAGAAAAAGACAAAGAAACATGGGTTACTAAATTGGTTGAAGATACGGAAACGAGATACTGGGTTAAGTGCCTTGTCAGGCACCAGTGATAAATCATGTGGAGCAAAATCTGTTAGCACACCTTCTAATCCTCAAGCAGAAACTGGTAATCATTCGGAGTCCAGACATTCCCATTCTCTACCTGCACAAAGCTCTCCATCAGCGGATCTTGTATCAGTAGCAAGAGAGGATAAGGAAATTCATGAGGATAGTTTATTGGGACAAGAGACACCTTTGATAAGCATTAAATCAATTGATGAGATTGATCTTTTGAGGGAGCAACAAAAGATTCTGTCAGGAGAAGTTGCTCTTCATTCAAGTGCTTTGAAGAGATTGTCTCAGGAAGCTGCAAGAAATCCTCAGAAGGATCAGATTCATGTGGAGATGGAAAGGTTGAAAGATGAAATCAAGTCTAAGAAGGAACAGATGGATTTTCTGGAAAAGCAGATTGCTGATTCTTTCATTGCCAAAAATAAGTTGGATGAATCAGGAGTATCACTAAGTCTCACCGAGCTGATGTCACTGTTAAATGAAAAATCCTTTGAACTGGAGGTCAAAACAGCAGATAACCATATAATTCAAGAACAGCTTAATCAGAAGATCCATGAATGTGAAAGCCTTCAAGAAACAGTTAGCTCTCTGAAACAGCAGCTTGCAGATGCATTAGAGTTGAGAAACTTAAGGCCTGTATTCAATCATTCTCAACATTTCTCTGTAACCAAAGACTACCATGGTGAACCTCACCTTGACAAGAAAGCAAGCGAGATAGAATGGCTGAAGCAAAAGTTGGCAGAACTAACAGAATCAAAAGAACAGCTAGAACTTCGGAATCAGAAACTGGCAGAAGAGAGTTCATATGCTAAAGGGCTAGCTTCAGCTGCTGCAGTGGAGCTTAAGGCATTGTCAGAAGAAGTTGCCAAACTCATGAACCAGAACGACAGATTATCGGCTGAGCTGGCAGCATCGAAGAGTTCTCCCGCCCAACGTAGAAGTAGTGGAACTGGAACAGTCCGAAATGGACGAAGAGAAAGCCATGTTAGACGAAATGATCAGGCTGGGTCAAACTCTGATATCAAAAGAGAACTCGCCCTGAGTAAAGAAAGGGAACTTTCATACGAAGCTGCTCTTTTAGATAGGGATCATAAAGAAGCTGAGCTTCAAGGGAAGATTGAAGAATCAAAGCAAAGAGAAGCATACTTGGAAAATGAACTTGCCAACATGTGGGTTCTTGTAGCTAAGTTAAAGAAGTCACAGGGAGCTGAAACTGATGTTTGA 2940 0.4289 MATKRSAKSKGLGLRGFKAANSPSSSTTSSSKQFLETSVDGLSSPASSSARSKTPYSFSESVPLDAKENVTVTVRFRPLNPREIRQGEEIAWYADGETVVRNEYNPSLAYAYDRVFGPTTTTRQVYDVAAQHIISGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETLNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTLFSLTIESSPCGENNEGEAVTLSQLNLIDLAGSESSRAETTGMRRREGSYINKSLLTLGTVISKLTEGRASHIPYRDSKLTRLLQSSLSGHGRISLICTVTPSSSNAEETHITLKFAHRAKHIEIQAAQNTIIDEKSLIKKYQHDIQCLKEELEQMKRGIVSVQSKETGEVDFVLLKQKLEDGQVKLQSRLEEEEEAKAALLGRIQRLTKLILVSTKASHTTRFSNRPGPRRRHSFGEEELVYLPYKRRDLISDDENTDLHVNLEGNAETADDSFKEEKKTKKHGLLNWLKIRKRDTGLSALSGTSDKSCGAKSVSTPSNPQAETGNHSESRHSHSLPAQSSPSADLVSVAREDKEIHEDSLLGQETPLISIKSIDEIDLLREQQKILSGEVALHSSALKRLSQEAARNPQKDQIHVEMERLKDEIKSKKEQMDFLEKQIADSFIAKNKLDESGVSLSLTELMSLLNEKSFELEVKTADNHIIQEQLNQKIHECESLQETVSSLKQQLADALELRNLRPVFNHSQHFSVTKDYHGEPHLDKKASEIEWLKQKLAELTESKEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNQNDRLSAELAASKSSPAQRRSSGTGTVRNGRRESHVRRNDQAGSNSDIKRELALSKERELSYEAALLDRDHKEAELQGKIEESKQREAYLENELANMWVLVAKLKKSQGAETDV 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02916 979 Coils Coil 752 779 - -
Pumo3g02916 979 Coils Coil 804 838 - -
Pumo3g02916 979 Coils Coil 442 476 - -
Pumo3g02916 979 CDD KISc_CENP_E 69 388 - -
Pumo3g02916 979 Coils Coil 938 958 - -
Pumo3g02916 979 MobiDBLite consensus disorder prediction 566 613 - -
Pumo3g02916 979 MobiDBLite consensus disorder prediction 895 915 - -
Pumo3g02916 979 Coils Coil 397 431 - -
Pumo3g02916 979 PRINTS Kinesin heavy chain signature 140 161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 PRINTS Kinesin heavy chain signature 338 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 PRINTS Kinesin heavy chain signature 254 271 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 PRINTS Kinesin heavy chain signature 289 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 423 IPR027417 -
Pumo3g02916 979 PANTHER CENTROMERE PROTEIN E 66 970 IPR027640 GO:0003777|GO:0007018
Pumo3g02916 979 MobiDBLite consensus disorder prediction 873 894 - -
Pumo3g02916 979 Coils Coil 846 880 - -
Pumo3g02916 979 ProSiteProfiles Kinesin motor domain profile. 69 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 FunFam Kinesin-like protein KIN-7G 62 419 - -
Pumo3g02916 979 MobiDBLite consensus disorder prediction 566 612 - -
Pumo3g02916 979 Coils Coil 677 704 - -
Pumo3g02916 979 Pfam Kinesin motor domain 75 388 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 MobiDBLite consensus disorder prediction 1 60 - -
Pumo3g02916 979 MobiDBLite consensus disorder prediction 19 59 - -
Pumo3g02916 979 MobiDBLite consensus disorder prediction 873 915 - -
Pumo3g02916 979 SMART kinesin_4 67 396 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo3g02916 979 ProSitePatterns Kinesin motor domain signature. 288 299 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo3g02916 979 Gene3D Kinesin motor domain 62 419 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02916 Pumo-Chr3 51753409 51772515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02916 1 720 Miscellaneous Gene Families AT5G06670 68.966 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02916 K11498 - gmx:100809643 1721.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02687 5 73209441 73230954 Pumo3g02916 3 51753409 51772515 PCT