Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g02661 ATGGGGGCTGGTGGCCGTACCGCTGTTCCTCCTGCCAGCAGGAAGCCAGAGGCTGACCCTTTGAAGCGGGTGCCATTTGAAAAACCTCCGTTTAGTCTCAGCCAGATCAAGAAGGCCATTCCACCTCACTGTTTCCAGCGTTCTGTTCTCCGCTCATTCTCCTATGTCGTTTATGACCTCACCATAGCCTTCTGCCTCTATTACGTTGCCACCCATTACTTCCACCTCCTTCCCAGTCCTCTCTCTTTCGTGGCATGGCCAATCTACTGGGCTGTCCAAGGTTGCATCCTTACTGGTGTTTGGGTCATTGCTCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGCTGCTTGATGATATTGTTGGCCTTGTTCTCCACTCCGCTCTCCTAGTCCCATACTTTTCGTGGAAATACAGCCATCGCCGTCACCACTCCAACACCGGTTCTCTCGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCTGGTATCCAGTGGTACTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACACTTGCCGTCACCCTCACACTTGGTTGGCCCTTGTACTTGGCTTTTAATGTTTCAGGAAGGCCTTATGATAGGTTTGCTTGCCACTATGACCCTTATGGTCCCATTTACTCTGATCGTGAACGACTTCAAATATTTATATCAGATGTGGGACTACTTACAGTATGCTATGGCCTTTTCTGTCTTGTCATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCATTGCTAGTGGTCAATGGATTTTTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTGCCGCACTACAATTCCTCTGAGTGGGACTGGCTGAGAGGAGCTTTAGCAACAGTGGATAGAGATTATGGAATCCTAAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACAAAGGCAATAAAGCCCATTTTGGGAGAGTATTATCGGTTTGATGAGACTTCATTTGTCAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCAAGGTACTGAGAGCAAAGGTGTATTTTGGTACAACAATAAGTTGTGA 1152 0.4722 MGAGGRTAVPPASRKPEADPLKRVPFEKPPFSLSQIKKAIPPHCFQRSVLRSFSYVVYDLTIAFCLYYVATHYFHLLPSPLSFVAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGIQWYSKYLNNPPGRVLTLAVTLTLGWPLYLAFNVSGRPYDRFACHYDPYGPIYSDRERLQIFISDVGLLTVCYGLFCLVMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRFDETSFVKAMWREARECIYVEPDQGTESKGVFWYNNKL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g02661 383 CDD Delta12-FADS-like 47 329 - -
Pumo5g02661 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 16 382 IPR012171 GO:0016491
Pumo5g02661 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Pumo5g02661 383 Pfam Fatty acid desaturase 86 344 IPR005804 GO:0006629
Pumo5g02661 383 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g02661 Pumo-Chr5 72779450 72786545 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g02661 1 383 Lipid Metabolism Gene Families AT3G12120 75.718 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g02661 K10256 - gmx:100805040 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g02661 5 72779450 72786545 Pumo5g02661 5 72779450 72786545 ECH
Pumo5g02661 5 72779450 72786545 Pumo3g02897 3 50797631 50801581 PCT