Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g02897 ATGGGAGGTGGTGGCCGAAGCTCCGCTCCACTTAAACAGACAAACAACAAAGTTGGGGAAGACCCATCAACAAAGAACAAAAAGCGTGTTCCACATGCAAAGCCACCATTCACTCTAAGCCAACTGAAGAAAGCAATCCCACCACACTGTTTCCACCGTTCAGTGCTTCGTTCATTCTCCTACGTCCTCTTCGACCTCACCATAGCCTCAATCCTCTTCTACGCCGCAGTAAATTACATCCCTACCCTCCCCAGCACCAACCACCTCTCCCTCCTCGCCTGGCCCCTCTACTGGTTCCTCCAGGGCTCCATCCTAACCGGCGTGTGGGTCCTCGCACACGAGTGCGGCCACCACGCCTTCAGCAACCACCAGTGGCTCGACGACACAGTCGGTCTAATCCTCCATTCGTTTCTTCTGGTCCCATACTTTTCATGGAAATACAGCCACCGCCGCCACCACTCCAACACCGGGTCCCTCGAACGCGACGAAGTGTTTGTGCCAAAAACAAAATCTGATATGAAATGGTACTCAAAGTACCTCAACAACCCACCAGGGAGAGTTCTCACACTTTTCATTACCCTAACCCTAGGTTGGCCTCTGTACCTAGCCTTCAACGTTTCGGGTAGAAAATACGAGAGATTCGCATGCCACTATGACCCTTATGGCCCCATTTACTCAGACCGCGAAAGACTCCAAATTTATCTCTCCGACGCTGGGATTCTCGCAGTGTGTTACGGTATCTACAAGGCTGTGATGGCACAAGGGCTTGTTTGGGTCGTTTGTGTCTACGGCGTGCCTTTGTTGGTGGTTAATGCGTTTTTGGTGCTCATCACTTTCTTGCAGCACACGCACCCTGCGGTTCCTCACTACGATTCCTCCGAGTGGGAGTGGCTGAGAGGTGCATTGGCCACCGTGGACAGAGACTACGGTGTTTTTTTGAACAATGTTTTGCATAACATAACCGACACGCACTGTGGCGCATCACTTGTTCTCCACCATGCCGCACTATCATGCCATGGAGGCTACCAAGGCCATAAAACCTATCTTGGGAGAGTACTATCACTTCGATGGGACTCCGATTTATAA 1086 0.5138 MGGGGRSSAPLKQTNNKVGEDPSTKNKKRVPHAKPPFTLSQLKKAIPPHCFHRSVLRSFSYVLFDLTIASILFYAAVNYIPTLPSTNHLSLLAWPLYWFLQGSILTGVWVLAHECGHHAFSNHQWLDDTVGLILHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKSDMKWYSKYLNNPPGRVLTLFITLTLGWPLYLAFNVSGRKYERFACHYDPYGPIYSDRERLQIYLSDAGILAVCYGIYKAVMAQGLVWVVCVYGVPLLVVNAFLVLITFLQHTHPAVPHYDSSEWEWLRGALATVDRDYGVFLNNVLHNITDTHCGASLVLHHAALSCHGGYQGHKTYLGRVLSLRWDSDL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g02897 361 Pfam Fatty acid desaturase 93 321 IPR005804 GO:0006629
Pumo3g02897 361 MobiDBLite consensus disorder prediction 1 33 - -
Pumo3g02897 361 Pfam Domain of unknown function (DUF3474) 10 68 IPR021863 GO:0016717
Pumo3g02897 361 CDD Delta12-FADS-like 53 333 - -
Pumo3g02897 361 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 18 333 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g02897 Pumo-Chr3 50797631 50801581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g02897 1 333 Lipid Metabolism Gene Families AT3G12120 69.670 4.54e-170 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g02897 K10256 - gmx:100780912 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g02897 3 50797631 50801581 Pumo3g02897 3 50797631 50801581 ECH
Pumo5g02661 5 72779450 72786545 Pumo3g02897 3 50797631 50801581 PCT