Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01444 ATGTCTTCTTCTGCTGTGGACTCAGTTCGTGACCCTCTCAACAACGCATGGAAAACCCTTCGTTTCCCCATCATCAAACCCAGCGAACTTCTCCTCTTGTTCCTCAAAGCGGGTCTCGCCCTTTCAACGTTGTTTATCATAACCCTCTTTTTCACTCTCTACAACCAACCCCTTTATCAAAACAAAAATCACACAACCTTGAAATACATGCTCCAACAGAAAACCCCTGAAGAAAAACAAGCACCCACCAACATCTCCCACATCCTGTTCGGCATTGGCGGCTCGTCCACCACCTGGCACACGCGCCGCCAATACTCTGAACTCTGGTGGCGCCACGGTGCCACCAGAGGCTTCGTCTGGCTGGAGAGCCATCCGCCAGACAACGCGACGTGGCCGGAGACCTCCCCGCCGTACAAGGTCTCCGGCGACACGTCACGGTTCAAGTACACGTGCTCGTATGGGTCACGTTCCGCGATCCGTATAGCGAGAATTGTTAAGGAGAGCTTCGAATTAGGTTTGGAAAATATAAGGTGGTTCGTTATGGGCGACGACGACACCGTTTTCTTCACCGACAACCTCGTCACGGTGTTGTCGAAATACGATCACAACGAAATGTACTACGTTGGTGGAAATTCTGAGAGCGTGGAGCAGGATGTTATACACTTTTACACTATGGCTTTTGGTGGTGGCGGGTTTGCGATAAGTTACCCTTTGGCGAAGGAATTGGTGAGAATTTTGGACGGTTGCATTGATCGTTACGCGGAGTTTTATGGGTCCGATCAGAAAGTTCAGAGTTGTATCAGTGAGATTGGGGTTCAGGTTACCAAAGAACCGGGTTTTCATCAGGTTGATATACGTGGGAGCGCATATGGTTTGTTAGCGGCACACCCGGTGGCACCGTTAGTGTCGTTGCACCACTTGGACTACGTGGACCCCATATTCCCCAACATGACCCGCGTTAACGCCGTTAAAAAGTTGGTAACGGCGTACAAGTCGGATCCGGGTCGGACCCTCCAGAAGAGCTTCTGCTACGACCTCCGTCGGAACTGGTCCGTTTCGGTGTCGTGGGGCTACAGCGTGGAGCTGTATCCCTCTCTGCGCACTACCAAGGAGCTGGAAACGGCGTTCGAGACATTCCGCACGTGGCGGACCTGGCGCAATGGCCCGTTCACGTTCAATACCCGACCCGTTAGTGGCGACAAGTGCGAGAGGCCGCACGTGTATGTTCTGGATCGGGTTCGCAGTGTGGGTGGGGACATGACCCGATCCAGCTACAGAAAAACCGTCGACGTTTGGGGGAAAGAGTGTGCGCGTGCCGAGTACGCGCGGGCTTTGGAAGTACAATACGTCGACGTTTATGCGTCTCGCTTTATGACGGACATGTGGAAAAAGGCGCCACGTAGGCAATGCTGCGAGATAATGGACGGCGCAGATGGGGTGAGCAGCAGTGTGGTTCGCGTCAAGATCAGAGGGTGTCGTCGATTTGAGAGTGTGACTCCTCCGTAG 1506 0.5325 MSSSAVDSVRDPLNNAWKTLRFPIIKPSELLLLFLKAGLALSTLFIITLFFTLYNQPLYQNKNHTTLKYMLQQKTPEEKQAPTNISHILFGIGGSSTTWHTRRQYSELWWRHGATRGFVWLESHPPDNATWPETSPPYKVSGDTSRFKYTCSYGSRSAIRIARIVKESFELGLENIRWFVMGDDDTVFFTDNLVTVLSKYDHNEMYYVGGNSESVEQDVIHFYTMAFGGGGFAISYPLAKELVRILDGCIDRYAEFYGSDQKVQSCISEIGVQVTKEPGFHQVDIRGSAYGLLAAHPVAPLVSLHHLDYVDPIFPNMTRVNAVKKLVTAYKSDPGRTLQKSFCYDLRRNWSVSVSWGYSVELYPSLRTTKELETAFETFRTWRTWRNGPFTFNTRPVSGDKCERPHVYVLDRVRSVGGDMTRSSYRKTVDVWGKECARAEYARALEVQYVDVYASRFMTDMWKKAPRRQCCEIMDGADGVSSSVVRVKIRGCRRFESVTPP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01444 501 PANTHER FRINGE-RELATED 37 496 - -
Pumo5g01444 501 FunFam Fringe-related protein-like 75 331 - -
Pumo5g01444 501 Pfam Protein of unknown function, DUF604 217 471 IPR006740 -
Pumo5g01444 501 Gene3D - 75 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01444 Pumo-Chr5 38076266 38079869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01444 74 500 Glycosyltransferase AT2G37730 64.252 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01444 - - gmx:100813750 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01444 5 38076266 38079869 Pumo5g01444 5 38076266 38079869 ECH
Pumo1g00174 1 2851496 2856484 Pumo5g01444 5 38076266 38079869 ECH