Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00174 ATGATGGAGAAGAAGATGAATCACACTCGCCTGGAATCTTGTCATGAATCTCCTCTTAAAATATCCAAATTCTCTTTTGTTCCAGAAAAACTTGGTGATATGGTTATACTCTTAATAAGGTTTGGCATACTTGTGTGCCTTGTTGCATCCATATCACTTGCTCTCCACTCAGCATTCGCTAAACCAGACCGGTGGTTCCCGTTACCGGAGCATATTCGTGCCGTCCAGAATACTTCAGTCATTGTCAGTGGACCAACAAACATCTCACATATTCAATTTGGCATTGCTGGATCCGCAAATACATGGCATGACCGTAGCAACTACAGTAAACTATGGTGGAATCCTAACACCACAAGAGGTTTTGTTTGGCTTGACAAGAAGCCTAAGATTTTGCACACTGACATGTTAGTACCACCATATCAAATCTCACGGGGCTGGACTCGGTTCAAGTACGTGCACTCAGCATCTGCAGTTCGGATAGCTCGGATAGTTTATGAGAGCTTTAAGCTTGGTTTGCCAAATGTCAGGTGGTTTGTAATGGGAGATGATGATACCGTGTTCTTTACTGAGAACTTGGTTACTGTGTTGGGAAAGTATGATCACAATGAAATGTATTATATTGGTGGGAATTCTGAGAGTGTGGAGCAAGATGTGATGCATTCTTATAACATGGCATTTGGTGGTGGTGGATTTGCAATCAGTTATGCATTAGCAACTCAACTAGCCAAAATAATGGATGGTTGTCTAAGTAGATACTTCTATTTTTATGGTTCTGATCAAAGAGTCTGGGCCTGTATTCATGAAATTGGGGTGCCCCTTACCAGAGAAAATGGATTCCACCAGCTTGACATAAGAGGGAATCCATATGGCCTTCTAGCAGCACACCCCTTGGTACCACTTGTATCGCTCCATCACCTCGACCAATTGAGCCCCTTGTTTCCCAACCAGACTCAAATACATTCAATGCAAAAGCTCATCAGTGCATACCACATTGACCCTGCCAGGATAGTGCAGCAAAGTTTATGCTATGATCATAAGCGTAGATGGTCAATATCTATTTCATGGGGTTACACTATACAAATCTATACAACATTGTTGATAGCAGCAGACTTGCAGATGCCATTGCAGACATTTCAGACTTGGCGAAGTTGGAAGGATGGTCCCTTCATATTCAATACTCGACCTATGAGCTCTGACCCGTGCCAGCAGCCAGCTATGTTTTTCCTGGACCAGGTTACAAAGGTGGGAAAAAGTGGAAGTATCACTATCTACAAGAGACATGAAGGCAAGGAAGCAAAGTGCAAGAGAGAAGGCACTAATAATGTGGAAGTGCAAAGAATTAGAGTTTCTGCCTTGAATCTGGATCCAGAATATTGGAAGAATGTACCGCGTAGGCATTGCTGTCAACTTTTGGGTGGTGGAAGCATAAAGAATGGCAGTATGGATATCAGGATTAGGAAGTGCAGACCTCAAGAAACAATTACTATTTAG 1491 0.4259 MMEKKMNHTRLESCHESPLKISKFSFVPEKLGDMVILLIRFGILVCLVASISLALHSAFAKPDRWFPLPEHIRAVQNTSVIVSGPTNISHIQFGIAGSANTWHDRSNYSKLWWNPNTTRGFVWLDKKPKILHTDMLVPPYQISRGWTRFKYVHSASAVRIARIVYESFKLGLPNVRWFVMGDDDTVFFTENLVTVLGKYDHNEMYYIGGNSESVEQDVMHSYNMAFGGGGFAISYALATQLAKIMDGCLSRYFYFYGSDQRVWACIHEIGVPLTRENGFHQLDIRGNPYGLLAAHPLVPLVSLHHLDQLSPLFPNQTQIHSMQKLISAYHIDPARIVQQSLCYDHKRRWSISISWGYTIQIYTTLLIAADLQMPLQTFQTWRSWKDGPFIFNTRPMSSDPCQQPAMFFLDQVTKVGKSGSITIYKRHEGKEAKCKREGTNNVEVQRIRVSALNLDPEYWKNVPRRHCCQLLGGGSIKNGSMDIRIRKCRPQETITI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00174 496 FunFam Fringe-related protein-like 79 330 - -
Pumo1g00174 496 PANTHER FRINGE-RELATED 34 494 - -
Pumo1g00174 496 Gene3D - 82 348 - -
Pumo1g00174 496 Pfam Protein of unknown function, DUF604 216 468 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00174 Pumo-Chr1 2851496 2856484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00174 5 494 Glycosyltransferase AT3G11420 56.016 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g00174 - - gmx:100802549 962.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00174 1 2851496 2856484 Pumo1g00174 1 2851496 2856484 ECH
Pumo1g00174 1 2851496 2856484 Pumo5g01444 5 38076266 38079869 ECH