Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04155 ATGACCGACAGGGTGTACCCATCCGCCAAGCCAGCCGCCAACCCGTCTTTCCCGGCGACAAAGGCTCAACTTTACGGCGCCACCCGCCCCACCTACCGCCCGCAGCCTCACCACCGGCGCCGGAGCCGGCGCCGGTGCTGCTGCACGTTCTTCTTCTGGCTGATCCTCACCGTGCTGATCCTCCTCCTCCTGATCGGCGTTGCCGGCACGGTGTTCTACCTCCTCTACCGCCCCCACCACCCCACCTTCACCGTCACGTCGCTGAAACTCTCGTACCTGAACCTCACCTCCTCCTCCACCCTTAACTCCCGCTTCGACATCACCGTCTCCGCCACCAACCCCAACAAGAAGATCCTCTTCGCCTACGACCCCACCACCATCACCATCCTCTCCGGCGACGTGGACGTCGGCGACGGCACCGTCCCCGCCTTCCAGCACCCCAAGAAGAACACCACTCTCATCAAAGCCTCCATCCTCAGCTCCGGCCACGCGCTCCAGACTGACGAGGCCTCGCGCTTGAAGTCCAGCATGAAGAGCAAGAAAGGGTTGCCACTCAAAGTCAATTTGGAAACTAAAGTGAAAGCCAAAATGGGAAATTTGAAAACCCCAAAAGTCGGAATCAGAGTCTCTTGCGACGGAATCAGAGTCACTCTTCCCTCCGGTAAGAAACCGGCGACAGCGTCCACTACTAACGCCAAGTGCGACGTCGATGTTCGGTTCAAGATCTGGAAGTGGACCGTTTGA 744 0.5941 MTDRVYPSAKPAANPSFPATKAQLYGATRPTYRPQPHHRRRSRRRCCCTFFFWLILTVLILLLLIGVAGTVFYLLYRPHHPTFTVTSLKLSYLNLTSSSTLNSRFDITVSATNPNKKILFAYDPTTITILSGDVDVGDGTVPAFQHPKKNTTLIKASILSSGHALQTDEASRLKSSMKSKKGLPLKVNLETKVKAKMGNLKTPKVGIRVSCDGIRVTLPSGKKPATASTTNAKCDVDVRFKIWKWTV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04155 247 Gene3D - 71 207 - -
Pumo4g04155 247 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 226 - -
Pumo4g04155 247 Pfam Late embryogenesis abundant protein 108 211 IPR004864 -
Pumo4g04155 247 SUPERFAMILY LEA14-like 61 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04155 Pumo-Chr4 82163870 82165347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04155 21 233 EF-hand Containing Proteins AT5G21130 27.778 4.80e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04155 - - gmx:100819194 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04155 4 82163870 82165347 Pumo7g00346 7 4517814 4518917 PCT