Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03995 ATGGTGTTGCAGAAGAGGTTAGACTATAGCTTTTATGGCTATCAGGTGCCAACCAAGCGCCGAGCTACCCGATCAGCTAGGAGGAGGGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTGTTGCAAGAGAAACAGAATCCAACCACATCCAGTGATAGATCATCGGAAAAGGATAGGGATGGATTTGTTAAAGAGGAATGCCAGGATGCAAATAAATCATTCAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAAATGTCAGCATGAATTTGTTAAAGAAGGATGCCCAGATGCAAATAAACCATTCAAAGCCGAGCTTTCGGATGAAGGAAGTAGTGACAGAAAATGTTTCTCTAATATTTCTTCCCAAGTATACAATCAAAGTTGCTGTTCGAAGGAACTCCCACAACATGAAATTGATGGCCATTCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAGTTTGTTGCTGAGACACTGGTAGATGGAAAAGGCCACAATGGAATGGAAAATTTAGCTAGCAAAGTTGAATTAGGTTCCTCTGGATGTCTAGAGAGTAGTGGTTGCAAGTTAGATGGTGATGTAAGTAAAGTAAAAGATGGTAAGTTTGGGAAGGTTCCCATTGATACTGGGACTGGGTTGTGCTGTTTTGAGGATCCCTTGGATGAAAAACCTCCACCACTGGTCAGTTCATGTGGCAATGCCAAGTTGTCTGGGTATGATGACAGCATGCCTCAGAGCTCATTGTCCAAAGGTTGTGACAATGTACTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTAGTACCAAAATAAAGTCTTCTAGGCCAATTACTTGTATAGATGATAGAAAAATAAAGAAAAGATTGGCTTCTAAATATCATAAGGTTTCTCAAGAATCCAAGCACGATATACTATCTAACAGTGGTGAGTTCATGCTTATAATACGAAATTACTGGCTTTCTTGTTACTCATTATGCTTCTTTGCTTGTTCACTAATCTGTTTGTCAATTGAAAACATGTTAGTTTTGGATGGAAATTTGAAGTCAGTTTACAGCAGTAGGAAGAACTATTATAAAAGCCAAAGATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTAACTCTAGCTCTGATACAAATTCTAACGGATATATCAGAAGTGATGACACTTGTTATTCACCCAAGAATGACGCGAACCAAAGTGTTTCTTGTTCATCTTCTGGGATGAGCAAAGATCATGGAACGTCATCCTTGGGACACTCCGCATTACGATCTAGGGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCCGAGCTTTTTATTGAGATTCCAGAAACTGCAACCATTGGGTCCTTGAAGAGGACAGTGATGGAGGCAGTGACTGCTGTACTTGGAGGTGGATTGCGTGTGGGCGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTTCAGACTGGAATTTCTCATGATAACCACCTGGATGCTTTGGGCTTCGCCTTGGAGCCTAATTGTTCACAAAACCGACTGCCTGCATGTGCTACAACAGATTCTCTCCGCGTTCCTAGTGCAGATATGCCTCAGCCTTTAATAGGGTACCCTTCAAGTCCTGCTGTAATTCATCAGAGGATTCAGGGCTTTTCTAACATGTTAGCCGAGCATCAAGCAACCGGTTCAGGTAACCATGTTGAAAGTGATCATGATTCAGCACCTTCTCCTATCAACACATCAGGTGAAAAAAAATTGACAGATTCGAAAGAACTTATTACTGTTCCTGAAATGGGTATGGAGGCACTGGCTGTGCTACCTGTGCATCAGAAGTCAAAGAGAACTGAGATTGCACAGCGCCGAATTCGTAGGCCTTTTTCCGTTGCTGAAGTGGAAGCACTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAACTTCGTGCTTTTGATAAAGCAAAGCATCGGACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCACCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCAGCAGACTAAGCAACAGCTCAAGCACCACTCAAAACCTTGCCTTCTCCTTTAA 2256 0.4198 MVLQKRLDYSFYGYQVPTKRRATRSARRRATFQRRLEDNQMCAFDLLATVADNLLQEKQNPTTSSDRSSEKDRDGFVKEECQDANKSFKTELSDEASCDRKCQHEFVKEGCPDANKPFKAELSDEGSSDRKCFSNISSQVYNQSCCSKELPQHEIDGHSCIASIVTSSSCSEKFVAETLVDGKGHNGMENLASKVELGSSGCLESSGCKLDGDVSKVKDGKFGKVPIDTGTGLCCFEDPLDEKPPPLVSSCGNAKLSGYDDSMPQSSLSKGCDNVLVDSRDDDENFSGCAHPSTKIKSSRPITCIDDRKIKKRLASKYHKVSQESKHDILSNSGEFMLIIRNYWLSCYSLCFFACSLICLSIENMLVLDGNLKSVYSSRKNYYKSQRSQMNIPFKKRKLFNSSSDTNSNGYIRSDDTCYSPKNDANQSVSCSSSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELFIEIPETATIGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNCSQNRLPACATTDSLRVPSADMPQPLIGYPSSPAVIHQRIQGFSNMLAEHQATGSGNHVESDHDSAPSPINTSGEKKLTDSKELITVPEMGMEALAVLPVHQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDKAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKHHSKPCLLL 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03995 751 MobiDBLite consensus disorder prediction 589 612 - -
Pumo4g03995 751 CDD SANT_TRF 653 703 - -
Pumo4g03995 751 Gene3D - 640 744 - -
Pumo4g03995 751 ProSiteProfiles Myb-like domain profile. 647 702 IPR001005 -
Pumo4g03995 751 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 647 706 IPR017930 -
Pumo4g03995 751 MobiDBLite consensus disorder prediction 429 448 - -
Pumo4g03995 751 MobiDBLite consensus disorder prediction 57 76 - -
Pumo4g03995 751 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 744 IPR031105 -
Pumo4g03995 751 SUPERFAMILY Homeodomain-like 653 734 IPR009057 -
Pumo4g03995 751 SUPERFAMILY Ubiquitin-like 452 537 IPR029071 -
Pumo4g03995 751 SMART sant 651 704 IPR001005 -
Pumo4g03995 751 MobiDBLite consensus disorder prediction 589 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03995 Pumo-Chr4 80586120 80591846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03995 - - gmx:100780881 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03995 4 80586120 80591846 Pumo4g03995 4 80586120 80591846 ECH
Pumo4g03995 4 80586120 80591846 Pumo1g00154 1 2563368 2566347 ECH