Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03948 ATGGCGGAAACGGAATCATCCACTACAGTTGAATCCATTTCCAGAGACGACAACAAGTTGTGGAAAGGAGCATTTGCTGTCGCTGGAATCATGGTTACCCTCGTCACCTATGGTGTCTTGCAGGAAAAGATCATGAGAGTACCGTATGGGGCAGAAAAGGAGTATTTCAAGTATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCTGGTTCTTTGCTGGCAAGTAAAAAAGCGATGGACCCAGTAGCTCCCATTTATAAGTATTGCCTTATCTCAGTATCAAACATACTAACTACAACTTGCCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTCCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGGGTACCCTCATTATGCAGAAGAGATATCAGGGACCTGACTATTTGTTGGCTTTTTTAATTACCCTTGGCTGCTCCATATTTATCCTATATCCGGCAGGAACAGACATGAGTCCTTACAGTAGAGGAAGGGAAAATACAGTTTGGGGCGTTGTCCTTATGGTTGGCTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAAAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTATGTTCTTGTATTCTTAGCCTGACAGGCCTTATCTTACAAGGACATTTAATACCAGCAATAGAATTTGTTTATCACCATCATGATTGTTTCTTTGACGTAGCATTGCTTTCGACTGTTGCCACAATTAGTCAATTTTTTATTTCATACACAATTCGCACCTTCGGTGCTCTGACATTTGCAACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTCATTGTCTTCGGCTCCCTTTATGGAAAAAGCTTCTCGAGGAAAGCGCCTCAAAAGACATCCTCCTCCGTAGCACTTGTTCAAAATGGGGATCCGAATAATTTGAAGGACAACCCGTGA 1053 0.4207 MAETESSTTVESISRDDNKLWKGAFAVAGIMVTLVTYGVLQEKIMRVPYGAEKEYFKYSLFLVFCNRITTSAVSAGSLLASKKAMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYQGPDYLLAFLITLGCSIFILYPAGTDMSPYSRGRENTVWGVVLMVGYLGFDGFTSTFQDKLFKGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAIEFVYHHHDCFFDVALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGSLYGKSFSRKAPQKTSSSVALVQNGDPNNLKDNP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03948 350 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 15 326 IPR013657 GO:0055085
Pumo4g03948 350 Pfam UAA transporter family 24 322 IPR013657 GO:0055085
Pumo4g03948 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03948 Pumo-Chr4 80092410 80098706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03948 16 323 Organic Solute Cotransporters AT5G59740 83.442 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03948 K15276 - gmx:100782989 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03948 4 80092410 80098706 Pumo4g03948 4 80092410 80098706 ECH
Pumo4g03948 4 80092410 80098706 Pumo11g01555 11 46805740 46811138 PCT