Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01555 ATGGCGGAAACAACCTCTGCTTCTGTTTCTTCTCCTGCGGGTGATTCGAATTGGAGAGAGAACAAGTTGTGGAAAGGCACATTTGCGGTCTCCGGAATCATGCTCACCCTCGTTACCTATGGCGTTTTGCAGGAAAAGATCATGAGAGTTCCTTATGGGGTGAACAAGGACTACTTCAAATACTCTCTCTTTCTTGTTTTTTGCAACCGCATCATGACATCTGCTGTTTCGGCTGGTGCTTTACTGGCAAGTAAAAAGGCATTGGATCCTGTAGCTCCCATTTATAAGTATTGTCTTGTGTCAGTATCGAACATACTCACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACTGTCATAATGCAGAAGAGATATCGGGGAACTGACTATTTGTTGGCCTTTGTAGTAACCCTTGGCTGCTCAGTGTTCATCCTGTATCCGGCAGGGACCGACATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGCGTTTTGCTAATGATTGGTTATCTTGGGTGTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCATACAAGGACATTTAATACCAGCTGTAGAGTTTGTTTATGTCCATAAAGATTGTTTCTTTGACATTGCATTGCTTTCAACTGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCTACTATAATGACAACAAGACAGTTGGTAAGCATCTTGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTGTAATTGTCTTTGGCGCAATTTATGCAAAAAGCTTCTTGAGGAAAGCACCTGAAAAGACAACCTCTTCTGTAGAACTTGTACAAAATGGAAATTCAAATAATTTGAAGGAGAACCCATGA 1062 0.4134 MAETTSASVSSPAGDSNWRENKLWKGTFAVSGIMLTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRIMTSAVSAGALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTVIMQKRYRGTDYLLAFVVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMIGYLGCDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCILSLTGLIIQGHLIPAVEFVYVHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSILLSCVWFAHPLSWEQWIGAVIVFGAIYAKSFLRKAPEKTTSSVELVQNGNSNNLKENP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01555 353 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
Pumo11g01555 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 257 323 - -
Pumo11g01555 353 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 20 329 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01555 Pumo-Chr11 46805740 46811138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01555 19 342 Organic Solute Cotransporters AT5G59740 80.982 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01555 K15276 - gmx:100782423 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03948 4 80092410 80098706 Pumo11g01555 11 46805740 46811138 PCT