LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g03873	ATGAGTTCAGCGGATCATGACTCCGACCCTCCCATCCGACTCCACCTGCCTCCCCTCTCACCGAGCCTCTTCGATTCCGAGCCATCGGAGCTCCAACAACCCAACGGATCCGCCGCCCGACCCTCCTCCGATCCCTCCAGCCCCACCAGCAGCGGTTACGCCGCCGAAAGGGGCAGCAGCACCGCCACGAGCGTCTCCCATGTCGACGACGTCCTTCACCACGAAATTCAGGAGATCACCATCCACGATTCCCAACCTCCCTCTCACTCCTCCTCCTGGCTTCCCGGAAAACGACACGGCGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTCCTGAGTCATTCTGGCAAACCAATATATTCTAGGTATGGAGACGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAGAATGGGGGTGACCATGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTAGTCTGCATCAGCTGCACGGAAGAGCCTTATGAATCACTAAGGGGGCAGTTGGAGCTTATTCATGGCCAGATGATTGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCCTTGCTTGGTGGAACAGACATTGTCTTCTCTTCACTAATCCACTCTTTTAGTTGGAATCCAGCTACATTTCTTCATGCCTATACTTGTCTACCTCTTGCATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAAGACGTTGCTGATTCTGGTGTCCTGTTTGCAATTCTGATGTGCAGACACAAGGTAATCAGTCTAGTTGGTGCTCAGAAAGCCTCTCTTCATCCAGATGATATGCTGCTCCTGGCCAACTTTGTTATGTCATCAGAATCCTTCAGGACTTCAGAAGCATTTTCTCCCGTTTGCTTGCCAAGATACAATGCTTTGGCATTTTTGTATGCTTATATCCACTTTTTTGATGATGACACATACTTGATGTTGCTGACCACGAGTTCGGATGCATTTTACCATCTTAAGGATTGCAGGATTCGTATCGAAACGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCCTTGCTAGATGGTGGGATGCATGTTGAGGATTTACCACCCTTACCTCGTTCTGGATCATCTCCTCGTTTGAGCCAGCATAGGCTTCCATCAGATTCTCCTGAAAGGGAACCTAATTGTCGCATTGGTGGTGTTGCTGGGTTGTGGCATTTCATATATCGCAGCATTTATCTGGATCAATATATATCTTCAGAGTTCTCATCACCAATTAACACTCCTAAGCAGCAGAAAAGACTGTATAGAGCTTACCAGAAACTTTTTGCATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAGTTTAGAAGGGATGAAAACTATGTTCTGCTCTGTTGGGTAACACAGGATTTTGAGCTTTATGCTGCATTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCAATCGGGCGTTAGTTTTGGTCATACTGCTGGGTTGGGCCGAATTTGAACTGCAAACAGGGAAGTGGGGATGGAAGCTGCCTTTGGTTTGGTGA	1653	0.4646	MSSADHDSDPPIRLHLPPLSPSLFDSEPSELQQPNGSAARPSSDPSSPTSSGYAAERGSSTATSVSHVDDVLHHEIQEITIHDSQPPSHSSSWLPGKRHGDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEEPYESLRGQLELIHGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSEAFSPVCLPRYNALAFLYAYIHFFDDDTYLMLLTTSSDAFYHLKDCRIRIETVLLKSNVLSEVQRSLLDGGMHVEDLPPLPRSGSSPRLSQHRLPSDSPEREPNCRIGGVAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRAYQKLFASMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRALVLVILLGWAEFELQTGKWGWKLPLVW	550

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	509	522	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	493	507	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	270	283	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	347	373	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	114	131	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	294	310	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	246	267	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	132	152	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	166	180	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	217	229	IPR004353	GO:0006623
	Pumo4g03873	550	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	319	342	IPR004353	GO:0006623
	Pumo4g03873	550	PANTHER	SAND PROTEIN-RELATED	34	523	IPR004353	GO:0006623
	Pumo4g03873	550	MobiDBLite	consensus disorder prediction	79	105	-	-
	Pumo4g03873	550	MobiDBLite	consensus disorder prediction	1	65	-	-
	Pumo4g03873	550	Pfam	First Longin domain of FUZ, MON1 and HPS1	114	234	IPR043972	GO:0016192
	Pumo4g03873	550	Pfam	Third Longin domain of FUZ, MON1 and HPS1	430	523	IPR043970	GO:0016192
	Pumo4g03873	550	MobiDBLite	consensus disorder prediction	25	65	-	-
	Pumo4g03873	550	MobiDBLite	consensus disorder prediction	396	421	-	-
	Pumo4g03873	550	Pfam	Second Longin domain of FUZ, MON1 and HPS1	275	366	IPR043971	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo4g03873	Pumo-Chr4	79077182	79083050	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g03873	K20195		-	gmx:100816794	996.882

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo4g03873	4	79077182	79083050	Pumo4g03873	4	79077182	79083050	ECH
	Pumo4g03873	4	79077182	79083050	Pumo11g01460	11	45069599	45076043	PCT