Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01460 ATGACCGACGAAGAAAGAGAGTCAGAGTCAGAGGGAGAGATTAGGGCTTCCATCGAGCCCGCTTCCGAGGACGCTCCGTCCAGCCCCGGCAGCAGCGGCTACGCCGGCGAAGGAGGAGGCAGCACCAGCGCCACCAGCGGCTCCCAATTTGAAATTGAGCGCCAAGAAATAGAGGAGGACACCGGAATTGAAATCGATAGAATCTCAATTTCCGATTCCAACACTAATTGGATTCCCGGGAAGCGCCACTTCGATGAGGACGATGCTTCCATATCGTGGAGGAAAAGGAAGAAGCATTTCTTCGTTCTCAGTCATTCCGGCAAACCTATATATTCTAGGTATGGAGATGAACACAGGCTTGCAGGGTTTTCGGCAACTTTGCAAGCAATCATTTCCTTTGTTGAGAACGGGGGTGATTCTGTCAAATTGGTGAGGGCTGGAAGGCATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTAGTCTGCATCAGCTCCACAGAAGAACCTTATGAGTCATTAAGGGGGCAGTTGGAGCTAATTTATGGTCAGATGCTTGTTATACTAACAAAATCAATAAACAGATGTTTTGAGAAGAACCCAAAATTCGATATGACACCCTTGCTTGGTGGAACAGAAATTGTCTTCTCTTCTCTAATCCACTCTTTCAGTTGGAACCCAGCTACATTTCTTCATGCCTATACTTGTCTCCCTCTTGCGTATGCAACAAGGCAAGCTGCAGGAGCTATTTTGCAAGATGTTGCTGATTCAGGTGTTTTGTTTGCAATACTGATGTGCAGGCACAAGGTAATCAGTCTTGTCGGTGCTCAGAAAGCTTCCCTTCATCCTGATGATATGCTGCTGCTGGCCAACTTTGTCATGTCATCTGAATCCTTCAGGCAAGTAGAATTGACGTCAGAATCATTTTCTCCAATTTGCTTGCCAAGATATAATCCTTCAGCATTTTTGTATGCATATATCCATTATTTTGATGCTGACACATACTTGATGTTGCTAACCACTAGTTCAGATGCGTTTTATCATCTAAAGGATTGCAGGATTCGTGTTGAATCAGTCCTTTTGAAGTCAAGCGTCCTTAGTGAAGTTCAGAGATCCTTGTTAAATGGGGGAATGCATGTTGAGGATCTGCCACCTATACCTCATTCTGGATCATCTCATTTGGGCCAGGAAACGCTTCCATCAGATTCTCCTGACAGATTTAAGGAAGCTAATTCTGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATATCTGGATCAGTATGTCTCTTCAGAGTTCCCATCATCAATTAATACGCCTCAGCAGCAGAAAAGACTGTACAGAGCTTACCAGAAGCTTTTTGAATCCATGCATGATAAAGGAATTGGGCCACACAAAACTCAATTTAGAAGAGATGAAAACTACGTTCTTCTCTGCTGGGTGACACAGGATTTTGAGCTCTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACTTGCCACCATTATGGCAACTTGTATTTTGGAGGAGACAGTCGATAG 1569 0.4474 MTDEERESESEGEIRASIEPASEDAPSSPGSSGYAGEGGGSTSATSGSQFEIERQEIEEDTGIEIDRISISDSNTNWIPGKRHFDEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHRLAGFSATLQAIISFVENGGDSVKLVRAGRHQVVFLVKGPIYLVCISSTEEPYESLRGQLELIYGQMLVILTKSINRCFEKNPKFDMTPLLGGTEIVFSSLIHSFSWNPATFLHAYTCLPLAYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRQVELTSESFSPICLPRYNPSAFLYAYIHYFDADTYLMLLTTSSDAFYHLKDCRIRVESVLLKSSVLSEVQRSLLNGGMHVEDLPPIPHSGSSHLGQETLPSDSPDRFKEANSGIGGPAGLWHFIYRSIYLDQYVSSEFPSSINTPQQQKRLYRAYQKLFESMHDKGIGPHKTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCHHYGNLYFGGDSR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01460 522 Pfam Second Longin domain of FUZ, MON1 and HPS1 259 355 IPR043971 GO:0016192
Pumo11g01460 522 PANTHER SAND PROTEIN-RELATED 15 511 IPR004353 GO:0006623
Pumo11g01460 522 Pfam First Longin domain of FUZ, MON1 and HPS1 98 219 IPR043972 GO:0016192
Pumo11g01460 522 MobiDBLite consensus disorder prediction 24 50 - -
Pumo11g01460 522 MobiDBLite consensus disorder prediction 1 50 - -
Pumo11g01460 522 Pfam Third Longin domain of FUZ, MON1 and HPS1 419 510 IPR043970 GO:0016192
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 150 164 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 254 267 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 116 136 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 201 213 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 335 361 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 482 496 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 498 511 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 307 330 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 230 251 IPR004353 GO:0006623
Pumo11g01460 522 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 98 115 IPR004353 GO:0006623
Pumo11g01460 522 MobiDBLite consensus disorder prediction 385 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01460 Pumo-Chr11 45069599 45076043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01460 K20195 - gmx:100816794 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03873 4 79077182 79083050 Pumo11g01460 11 45069599 45076043 PCT