Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03748 ATGTGTGTAATAACTTTGCTATGTGGCAAACCTTGGACCTTCAAGCTGGAAGCGTGGTGGTCTTGGTTGGCGGTTATGCCCAATATCAGATCAGTAATGGCAACCTCTTCTTTCTTCTTCACTTTGCCATTGCTGCTTCTCACTGTTTCGGATTTGTTTGTGCAAAGCCGTGGCCTTAATTTTGGAATCAACTACGGGCAAATAGCCAACAACCTTCCATCTCCATCTCGTGTGGCTGTTCTTATAAAATCTCTGAATGTCAGCAGAATCAAACTCTATGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTGGAATTCATTATAGGACTAGAGAACGAGTATCTGCAGAGCATGAGAGACCCTTCTAAGGCTCAGAGCTGGATTCAACAGCATGTACAACCTTACATTTCACAAACCAAAATCACTTGCATCACTGTAGGAAATGAGATCTTCAACTACAATGACACTCAGCTCACAGCAAATCTTCTCCCTGCAATGCAAAGTGTGTATAATGCCCTTGCTAATCTAGGACTAGCACAACAAGTTACTGTTACAACTGCTCATTCTTTCAACATTTTAGCCAATTCTTTCCCTCCTTCATCTGGGGCATTCAGGCAAGATCTGATACAATACATTCAACCCCTCCTCAGCTTTCATGCTCAAATCAAATCACCCTTCCTCATTAATGCATATCCCTTTTTTGCATACAAGGACAACCCAAACCAAATTTCCTTAAATTATGTGCTGTTTCAGCCAAATTCAGGGTCCATTGATCCAAATACCAATTTGCATTATGATAACATGTTGTATGCTCAAATTGATTCTGTCTATGCCGCCATCAAAGCACTAGGACATACTGATATTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCCAAGGGTGACCCTGATGAGGTTGGAGCCACACCACAAAATGCAGAAATATATAATAGTAATTTGTTTAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCAAGGCCATCTGTTCCAATTGATATTTTTGTCTTTGCACTTTTCAATGAGGATTTGAAGCCTGGTCCTGTTTCAGAGAGAAATTATGGCCTTTATTATCCTGATGGTACCCCAGTTTATAACATTGGATTACAAGGTTATCTCCCAGAAATGGTTATAGAGTCCAAATCTAACGCTTTGTCCATCAATTTTCTCATCTACATATTTACATGTTTGTTGTTCACTTGGGAGCTTTCAAGACAGTGA 1251 0.4045 MCVITLLCGKPWTFKLEAWWSWLAVMPNIRSVMATSSFFFTLPLLLLTVSDLFVQSRGLNFGINYGQIANNLPSPSRVAVLIKSLNVSRIKLYDADPNVLSAFSNSDVEFIIGLENEYLQSMRDPSKAQSWIQQHVQPYISQTKITCITVGNEIFNYNDTQLTANLLPAMQSVYNALANLGLAQQVTVTTAHSFNILANSFPPSSGAFRQDLIQYIQPLLSFHAQIKSPFLINAYPFFAYKDNPNQISLNYVLFQPNSGSIDPNTNLHYDNMLYAQIDSVYAAIKALGHTDIEVRISETGWPSKGDPDEVGATPQNAEIYNSNLFKRIEQKQGTPARPSVPIDIFVFALFNEDLKPGPVSERNYGLYYPDGTPVYNIGLQGYLPEMVIESKSNALSINFLIYIFTCLLFTWELSRQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03748 416 Pfam Glycosyl hydrolases family 17 62 377 IPR000490 GO:0004553|GO:0005975
Pumo4g03748 416 SUPERFAMILY (Trans)glycosidases 61 377 IPR017853 -
Pumo4g03748 416 Gene3D Glycosidases 60 383 - -
Pumo4g03748 416 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 48 380 IPR044965 GO:0004553|GO:0005975
Pumo4g03748 416 FunFam Glucan endo-1,3-beta-glucosidase 14 59 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03748 Pumo-Chr4 77310569 77312476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03748 111 411 Glycoside Hydrolase AT2G27500 66.225 8.22e-156 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03748 - - gmx:100811467 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03748 4 77310569 77312476 Pumo4g03748 4 77310569 77312476 ECH
Pumo4g03748 4 77310569 77312476 Pumo11g01310 11 42886551 42891158 PCT