Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01310 ATGATGATCAGATCAGTAATGATGACAAGCTGTTCCTTCTTCATATCAATGCTTTTGTTTCTTCTCACCATTTCGGATTTGTTTGTGCAAATCCATGGCCTTGGTTTTGGAATCAACTACGGACAGATAGGCAACAATTTACCTCTTCCATCTCAAGTGGCTGTTCTTATAAAATCTATGAATGTGAGTAGGATTAAGCTCTATGATGCTGATCCAAATGTTCTAGTAGCCTTCTCTCAATCCAATGTGGAATTCGTTATAGGACTTGGAAATGAGTACCTAGAGAACATGACAAACCCTTCTAAAGCTCAAACTTGGATTCAGCAGCATGTTCAACCTTACCTTGCACAGACCAAAATCACTTGCATCACTGTGGGAAATGAGGTGTTCAATAGCAATGATACTCAGCTAATGTTGAACCTCCTCCCAGCAATGCAAACTGTGCATGATGCCCTTGTTAATCTTGGACTAGACCAACAAGTTACTGTCACAACTGCTCATTCCTTCAACATATTATCCAATTCCTACCCTCCTTCATCTGGGGCATTTAGGCAAGATCTTGTGCAATATATTCAACCCCTTCTTGACTTTCATGCTCAAATCAACTCACCTTTCCTCATCAATGCATACCCTTTCTTTGCATACAAAGACAACCCAGATGAGGTTTCCTTAAACTATGTGCTTTTTCAGCCAAATCAAGGTATGGTTGATCCAAATACCAATTTGCATTATGACAACATGTTGTATGCTCAAATTGATGCTGTCTATGTTGCCATCAAACAAATGGGGCATGATGACATTCAAGTAAGGATTTCTGAGACTGGTTGGCCTTCTAATGGTGACCCTGAAGAGGTTGGAGCTACACCACAGAATGCAGCGTTGTACAATAGTAATTTGCTCAAAAGGATAGAGCAGAAACAAGGAACTCCTGCAAATCCATCGGTTCCAATTGATATATATGTCTTTGCACTTTTTAATGAGAATTTGAAGCCTGGTCCAGCATCAGAGAGAAACTATGGCCTTTACTATCCTAATGGTACTCCAGTTTATAACATTGGATTGAAGGGTTATCTCCCACAGATGCCTATGGCAGCTAAATCCAATACTTTGTCTGTCAATTTTCTTGTATGTATAATTACATGCTTCATCTTTGCTTTGGAGCTTTCAAGATGGTGA 1176 0.3963 MMIRSVMMTSCSFFISMLLFLLTISDLFVQIHGLGFGINYGQIGNNLPLPSQVAVLIKSMNVSRIKLYDADPNVLVAFSQSNVEFVIGLGNEYLENMTNPSKAQTWIQQHVQPYLAQTKITCITVGNEVFNSNDTQLMLNLLPAMQTVHDALVNLGLDQQVTVTTAHSFNILSNSYPPSSGAFRQDLVQYIQPLLDFHAQINSPFLINAYPFFAYKDNPDEVSLNYVLFQPNQGMVDPNTNLHYDNMLYAQIDAVYVAIKQMGHDDIQVRISETGWPSNGDPEEVGATPQNAALYNSNLLKRIEQKQGTPANPSVPIDIYVFALFNENLKPGPASERNYGLYYPNGTPVYNIGLKGYLPQMPMAAKSNTLSVNFLVCIITCFIFALELSRW 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01310 391 FunFam Glucan endo-1,3-beta-glucosidase 14 34 358 - -
Pumo11g01310 391 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 355 IPR044965 GO:0004553|GO:0005975
Pumo11g01310 391 Pfam Glycosyl hydrolases family 17 37 352 IPR000490 GO:0004553|GO:0005975
Pumo11g01310 391 SUPERFAMILY (Trans)glycosidases 36 353 IPR017853 -
Pumo11g01310 391 Gene3D Glycosidases 35 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01310 Pumo-Chr11 42886551 42891158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01310 86 385 Glycoside Hydrolase AT2G27500 66.445 7.97e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01310 - - gmx:100818948 741.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03748 4 77310569 77312476 Pumo11g01310 11 42886551 42891158 PCT