Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03746 ATGACCGAGGTCCTCCACTCCCCACCCCATTTTGCTTCATCACCAACAACAACAACAAAGACAAGGACAACCTCAGCAACCACAACAACAACCTCAACCCCTTCTTCCTCTTCATTCTCTTCTCGCAATGCCTTTCTCCGACCGCACCTCTCTCTCTTGGCTTTTCTGCTGACCCTTCTCAGGAAATCCTTCCAGCTTCCTCGCAAAAACATCTGCTCCATTATGGACATAGGCTCCCCAACTAACGTGCGCCATGTTGCGCATGTCACCTTTGATAGGTTCAACGGTTTCTTGGGCTTGCCTGTTGAGTTTGAACCTGAAGTCCCCAGAAGGCCTCCTAGTGCTAGTGCATCTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTGTCGTATGACTCAAGAGGGAACAGTGTGCCAACGATTCTGCTGTTGATGCAAAGGCATCTGTATGCTCAAGGAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAACGCGGACAATGGTCAAGAGGAACATGTTAGGGATCAATTGAATTTGGGAGTGGTCCCGGAAGGCATTGATGTACATTGTTTGGCAGGGCTAATTAAGGCTTGGTTTAGGGAACTTCCTACCGGCATTCTGGATTCATTATCACCGGAGCAGGTCATGCAATGCCAGACTGAGGATGAATGTGCTGAACTAGTGAGACATCTACCTCATACTGAAGCTTCACTCTTGGACTGGGCTATCAATCTGATGGCTGATGTTGTCCATCATGAACATGTTAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGACCCTATATCTGCATTGATGTATGCAGTTCAAGTAATGAACTTCTTGAAGACACTTATATTAAGGACACTGCGGGAAAGAAAGGATTCTGTGGTAGAACCTTATCCTAGATATTATTTAGAACCTTCTGTTGATAATGAAAACCATAGACTTTTGGAGTCCTTCCATCAAGATACTCCTGCAGAAAATGAAGAGGCTCAGGAAAACTTTGTTTTAGAGAAAACTGCCTTAGAGTGTTCCCCTGAATCACTCCAAAACAACTCAACTGGTGGAGAACCTGACAGTTTGACAAACTCTTCTGAGAATCTTGTTTGCAATGAGGATTTGTATTGTGAGTTTCCACCCGTAGGAAACATGGGGAAGAGTAAAACTGGCCAATCAAGCAAGTCAAATGCTAGAAAAGAGTCCAAAAAGACAAGAGGTAGCAACCTGTGA 1260 0.4476 MTEVLHSPPHFASSPTTTTKTRTTSATTTTTSTPSSSSFSSRNAFLRPHLSLLAFLLTLLRKSFQLPRKNICSIMDIGSPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASASVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYAQGGLQVEGIFRINADNGQEEHVRDQLNLGVVPEGIDVHCLAGLIKAWFRELPTGILDSLSPEQVMQCQTEDECAELVRHLPHTEASLLDWAINLMADVVHHEHVNKMNARNIAMVFAPNMTQMADPISALMYAVQVMNFLKTLILRTLRERKDSVVEPYPRYYLEPSVDNENHRLLESFHQDTPAENEEAQENFVLEKTALECSPESLQNNSTGGEPDSLTNSSENLVCNEDLYCEFPPVGNMGKSKTGQSSKSNARKESKKTRGSNL 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03746 419 Gene3D CRIB domain 74 107 IPR036936 -
Pumo4g03746 419 MobiDBLite consensus disorder prediction 1 42 - -
Pumo4g03746 419 SUPERFAMILY GTPase activation domain, GAP 117 296 IPR008936 -
Pumo4g03746 419 MobiDBLite consensus disorder prediction 403 419 - -
Pumo4g03746 419 MobiDBLite consensus disorder prediction 7 42 - -
Pumo4g03746 419 Pfam RhoGAP domain 139 273 IPR000198 GO:0007165
Pumo4g03746 419 Gene3D Rho GTPase activation protein 110 305 IPR008936 -
Pumo4g03746 419 CDD RhoGAP 139 295 - -
Pumo4g03746 419 ProSiteProfiles Rho GTPase-activating proteins domain profile. 122 307 IPR000198 GO:0007165
Pumo4g03746 419 SMART PBD_5 77 111 IPR000095 -
Pumo4g03746 419 Pfam P21-Rho-binding domain 76 103 IPR000095 -
Pumo4g03746 419 MobiDBLite consensus disorder prediction 390 419 - -
Pumo4g03746 419 FunFam Rho GTPase-activating protein 5 107 300 - -
Pumo4g03746 419 CDD CRIB 75 115 - -
Pumo4g03746 419 ProSiteProfiles CRIB domain profile. 77 90 IPR000095 -
Pumo4g03746 419 PANTHER MKIAA1688 PROTEIN 1 414 IPR044785 GO:0005096
Pumo4g03746 419 SMART RhoGAP_3 136 299 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03746 Pumo-Chr4 77274580 77277773 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03746 - K20642 gmx:100776004 707.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03746 4 77274580 77277773 Pumo11g01306 11 42849463 42853370 PCT