Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01306 ATGTTGCGCATGTCACCTTCGACAGGTTCAATGGCTTCTTGGGCTTGCCCCGTGAGTTCGAGCCCGAAGTCTCCACGAGGCCTCCCAGTGCTAGAATCCATGCAGTTATCATATGACACGAGAGGGAACAGTGTGCCAACCATACTGCTACTAATGCAAAGGCACTTGTATGCTCTCGGAGGGTTGCAGGCAGAGGGGATTTTCAGAATTAATGCAGACAATAGTCAAGAGGAGCATGTTAGGGATCAATTAAATAGGGGATTGATCCCAGAAGATGTTGATATACATTGTTTGGCAGGACTAATCAAGGCTTGGTTTAGGGAACTGCCTACCGGTGTTCTGGATTCTTTATCACCAGAGCATGTAATGCAATGCCAGACTGAAGACGATTGTGCTGAACTGGCGAGGCAGCTACCTCACACCGAAGCTTCCCTCTTGGATTGGGCTATCAATCTAATGGCTGATGTTGTCCAAGAGGAGCACCTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCATATGGCAGACCCTTTGACTGCATTGATGTATGCAGTTCAACTGATGAACTTCCTGAAGACTCTTATATTAAGGACACTGCGAGAAAGAAAGGATTGTGTGGTAGAATCGTCTCCTGGATTTTGTTTAGAGCCTTCTGATGAGAACGGGGACCGCAGTCTTTCGGAGTCCTGCCAGCAAGATGATGATGTTGCCACTGAAAATGAAGAGGCTGGGGAAACCTTTGTTTCTGAGAAAACTGAATTAGAATGTTCCCCTGAATCTCTCCAAAGCAAGTATTCAACTGAAGGAGAATGTGGCAGTTTGATAGGCTCTTCTGAGAATCTGGTTTGTGAGAAGGACTTGTATTGTGAGTTTCCACCCAAAGGAAACATTGGAAAGAGTAAGAGTGGACAATCAAGTAATTCCAGTTCTAAAAAAGGGTCCAAAAAAACCAGAGCCCTGCTCCAACCTGTGATCCATGCAACAGTGGCTGTTGATAAAAAGGGCATTAGCAATCTGAGCCGCATAGATTCAAGATCAGAACGGATAGAAGCCTGGCGGTGA 1083 0.4571 MLRMSPSTGSMASWACPVSSSPKSPRGLPVLESMQLSYDTRGNSVPTILLLMQRHLYALGGLQAEGIFRINADNSQEEHVRDQLNRGLIPEDVDIHCLAGLIKAWFRELPTGVLDSLSPEHVMQCQTEDDCAELARQLPHTEASLLDWAINLMADVVQEEHLNKMNARNIAMVFAPNMTHMADPLTALMYAVQLMNFLKTLILRTLRERKDCVVESSPGFCLEPSDENGDRSLSESCQQDDDVATENEEAGETFVSEKTELECSPESLQSKYSTEGECGSLIGSSENLVCEKDLYCEFPPKGNIGKSKSGQSSNSSSKKGSKKTRALLQPVIHATVAVDKKGISNLSRIDSRSERIEAWR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01306 360 MobiDBLite consensus disorder prediction 1 26 - -
Pumo11g01306 360 MobiDBLite consensus disorder prediction 1 20 - -
Pumo11g01306 360 ProSiteProfiles Rho GTPase-activating proteins domain profile. 29 210 IPR000198 GO:0007165
Pumo11g01306 360 MobiDBLite consensus disorder prediction 304 327 - -
Pumo11g01306 360 Gene3D Rho GTPase activation protein 27 211 IPR008936 -
Pumo11g01306 360 SUPERFAMILY GTPase activation domain, GAP 35 203 IPR008936 -
Pumo11g01306 360 Pfam RhoGAP domain 46 180 IPR000198 GO:0007165
Pumo11g01306 360 SMART RhoGAP_3 43 206 IPR000198 GO:0007165
Pumo11g01306 360 PANTHER MKIAA1688 PROTEIN 20 324 IPR044785 GO:0005096
Pumo11g01306 360 CDD RhoGAP 46 202 - -
Pumo11g01306 360 MobiDBLite consensus disorder prediction 305 323 - -
Pumo11g01306 360 MobiDBLite consensus disorder prediction 224 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01306 Pumo-Chr11 42849463 42853370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01306 - K20642 gmx:100784019 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01306 11 42849463 42853370 Pumo11g01306 11 42849463 42853370 ECH
Pumo4g03746 4 77274580 77277773 Pumo11g01306 11 42849463 42853370 PCT