Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03696 ATGGAGTTTCAGTTTCAGTTTCAGCTCAACCATCTTTTATACTTATTCATCCTTATCCTTTCAGCTCTCCACGCTCAAGCTACTACCTTCAGATACTGCGCTGATGTAAACTATGCTGTGAAGGTGTCTGGAGTTGAAATTACACCAGAACCTGTTGTGCGTTCTAGGCCTGTCACCTTTAAGATTTCAGCTGCTACTGGTGAAGCTATTTATGGAGGAAAGTGGGTAACTACAGTTGCATACTTCGGCTTTGTTGTCCATAAAGAAATCCATGATTTTTGTGAGGAAATATCATGTCCTGTTGCTACTGGCAATTTTGTGGCTGCTCACACCCAAAAATTGCCTGCATTTTCCCCACCGGGCACCTACACCGTGGAGATGACACTAAAAAATGAGAAGAACGAGCCATTAACTTGCATCTCCTTTAAATTCAAAATCGTTTTTGGATCTTTTGTGTCTGATATCTGA 468 0.4145 MEFQFQFQLNHLLYLFILILSALHAQATTFRYCADVNYAVKVSGVEITPEPVVRSRPVTFKISAATGEAIYGGKWVTTVAYFGFVVHKEIHDFCEEISCPVATGNFVAAHTQKLPAFSPPGTYTVEMTLKNEKNEPLTCISFKFKIVFGSFVSDI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03696 155 Gene3D - 28 149 - -
Pumo4g03696 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 11 147 IPR039670 GO:0015918|GO:0032934
Pumo4g03696 155 FunFam Putative phosphatidylglycerol/phosphatidylinositol transfer protein isoform A 28 149 - -
Pumo4g03696 155 SUPERFAMILY E set domains 27 147 IPR014756 -
Pumo4g03696 155 CDD PG-PI_TP 30 144 IPR033917 GO:0032366
Pumo4g03696 155 Pfam ML domain 28 146 IPR003172 -
Pumo4g03696 155 SMART pgtp_13 30 144 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03696 Pumo-Chr4 76576071 76579413 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03696 - - gmx:100818265 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03696 4 76576071 76579413 Pumo4g03696 4 76576071 76579413 ECH
Pumo4g03696 4 76576071 76579413 Pumo11g01242 11 41921589 41926669 PCT