Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01242 ATGGAGTTTCAGTCTCTTCCCAAATTCTACCTTCTTCTTTCCTTATCCATTCTCTTCCTTGCACCCTTTCACGCTCAAGCTAAAGTTAGTTTCAAATACTGCGATAAGAAGGCAGACTATGCTGTGAAGGTGTCTGGAGTTGAAATATCACCAAACCCTGTAGTGAGTGGCGACCCGGCTACCTTTAAGATCTCAGCTACTTCTGGTAAAGCTATTTATGGTGGAGAGGTGGTAATTGGAGTTTCATACGTTGGGGTACCTGTCCATACTGAAAGAATTGATCTTTGTGAAGAAGTAACCTGTCCTGTTGCTAATGGCAATTTTCTGATTTCTCACACCCAAACATTGCCTTCAATTACTCCACCGGGACCCTACTCTCTGAAGATGACACTGAAGAATGATCGGGACGAGGTGTTAACTTGCATTAAGTTTAATTTTAAAATTGTTTTCGGATCTTTTGTGTCTGATGTGTGA 474 0.4156 MEFQSLPKFYLLLSLSILFLAPFHAQAKVSFKYCDKKADYAVKVSGVEISPNPVVSGDPATFKISATSGKAIYGGEVVIGVSYVGVPVHTERIDLCEEVTCPVANGNFLISHTQTLPSITPPGPYSLKMTLKNDRDEVLTCIKFNFKIVFGSFVSDV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01242 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Pumo11g01242 157 Pfam ML domain 29 148 IPR003172 -
Pumo11g01242 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Pumo11g01242 157 Gene3D - 27 151 - -
Pumo11g01242 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Pumo11g01242 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 8 149 IPR039670 GO:0015918|GO:0032934
Pumo11g01242 157 SMART pgtp_13 31 146 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01242 Pumo-Chr11 41921589 41926669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01242 - - gmx:100500637 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03696 4 76576071 76579413 Pumo11g01242 11 41921589 41926669 PCT