Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03691 ATGGATCGCTGCATCTATGGCATCTTCTTCACTTACCTTCTCTTTCTGTCCCTCCTCTCCGCTTTCTCACAGGCATTCACGGAGAACCCAAACCCGAAGCCGCGTGTCTCTTCTTCTTCTTCTTCGTCACCGACAGGTCAGATTAACTCTAACTCAATCCTCGTTGCTCTTCTCGACTCGCATTACACGGAACTCGCGGAGCTCGTCGAAAAAGCCATGCTGTTGCAAAAACTAGAGGACACTGTCGCCACTCACAACATAACAATCTTCGCTCCAACAAACGAAGCCTTGGACCGCAACCTCGACACTGATTTCAAGCGGTTCCTTCTAGAACCCGCGAACCTTCACTCCCTCCAAACGCTCCTCCTCTCTCACATCGTCCCCGCCCAAATCGGATCCAAAACCCTAACCCGCCACGTCACCACCCTCTCCAACCACCAGCTCCACCTCTCCGCAAACCTCACCACCGTCGACGACGCCCGCGTCACCCACCCGGATGTCGTGACCCGACCCGACGGCGTCATCCACGGAATCGACCGCCTCCTCCTCCCCCGCTCCGTCGAGGACGACTTCAACCGCCGCCGCACCCTCCGCTCCATCACCGCCGTCAAACCGGAAGGCGCTCCCGAAATCGACCCGAGAACCCACCGTCTCAAAAAACCTCCCCCGCCGGCGAAACCGGGCTCCCCGCCGGCGCTTCCGATCTACGACGCGATGGCTCCGGGACCCGCGCTGGCTCCGGCGCCGGCGCCGGGGCCAGGCGGCCCGCACCACCACTTCAACGGCGAGAAACAAGTCACCGATTTCATCCACACGCTCCTCCACTACGGCGGGTACAACGAGATGGCGGACATTCTCGTAAACCTAACGTCGTTAGCCGTTGAAATGGGTCGTTTAGTTTCCGAGGGTTACGTTCTCACCGTTTTGGCCCCAAACGACGAAGCGATGGCGAAGCTGACGACGGAGCAGTTGAGCGAACCGGGCGCGCCGGAGCAGATAATGTACTATCACATAATACCGGAGTACCAGACCGAAGAGAGCATGTACAATGCTGTTAGAAGGTTCGGGAAGGTCCGGTATGACACCCTAAGGTTGCCGCATAAGGTGGTGGCTCAAGAGGCTGATGGGTCCGTTAAATTCGGGCACGGAGACGGGTCGGCTTATTTGTTCGACCCGGATATTTACACCGATGGTCGGATATCGGTTCAGGGGATTGATGGGGTTTTATTTCCGGTGAAGGAGGAGGAGGAGGCGGAGCGGGTTAGACCCGTTACCCGGACGGGTCAAAACGGTGCTAAAGTTGTTGTCAAGCACAGGAGAGGAAAATTGCTGGAAGCAACGTGCTGGATGCTTGGAACTTTTGGACAGCATTCTAGATTCGCCTCTTGTCAATGA 1395 0.5713 MDRCIYGIFFTYLLFLSLLSAFSQAFTENPNPKPRVSSSSSSSPTGQINSNSILVALLDSHYTELAELVEKAMLLQKLEDTVATHNITIFAPTNEALDRNLDTDFKRFLLEPANLHSLQTLLLSHIVPAQIGSKTLTRHVTTLSNHQLHLSANLTTVDDARVTHPDVVTRPDGVIHGIDRLLLPRSVEDDFNRRRTLRSITAVKPEGAPEIDPRTHRLKKPPPPAKPGSPPALPIYDAMAPGPALAPAPAPGPGGPHHHFNGEKQVTDFIHTLLHYGGYNEMADILVNLTSLAVEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHIIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPVKEEEEAERVRPVTRTGQNGAKVVVKHRRGKLLEATCWMLGTFGQHSRFASCQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03691 464 MobiDBLite consensus disorder prediction 222 237 - -
Pumo4g03691 464 MobiDBLite consensus disorder prediction 201 255 - -
Pumo4g03691 464 Pfam Fasciclin domain 304 411 IPR000782 -
Pumo4g03691 464 Pfam Fasciclin domain 61 184 IPR000782 -
Pumo4g03691 464 ProSiteProfiles FAS1/BIgH3 domain profile. 49 182 IPR000782 -
Pumo4g03691 464 Gene3D FAS1 domain 31 185 IPR036378 -
Pumo4g03691 464 FunFam Fasciclin-like arabinogalactan protein 16 261 412 - -
Pumo4g03691 464 Gene3D FAS1 domain 289 411 IPR036378 -
Pumo4g03691 464 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 3 458 IPR044654 -
Pumo4g03691 464 SMART fasc_3 88 185 IPR000782 -
Pumo4g03691 464 SMART fasc_3 307 412 IPR000782 -
Pumo4g03691 464 ProSiteProfiles FAS1/BIgH3 domain profile. 266 394 IPR000782 -
Pumo4g03691 464 SUPERFAMILY FAS1 domain 245 412 IPR036378 -
Pumo4g03691 464 SUPERFAMILY FAS1 domain 51 185 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03691 Pumo-Chr4 76511918 76515557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03691 - - gmx:100782264 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03691 4 76511918 76515557 Pumo11g01237 11 41854605 41859231 PCT