Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03684 ATGGCGGAAACCTTAAGCCCTAATCCAACGACCGGCCACAAAAAGAGGGTTCCGATGTCCGCTCGTATCCAATCTCCGACGAGCGCTTTCTTCGTGGGCTCCAACGACGACCAGCTTGAACGGGCCCAGGCCCGTGCAGCCCGCGCCGCCGCTATCCGCCGCAACTCCCTCGCCGCCAACTTCCACTCCCAACCCCCCACTTCTCATCCCTGTCTGAACAAACACCAGATTCTTGACTTGTTCCACAACTGCATAAAGCTTGCCTCCGAAAATAAAATTAATCAGAAAAACACATGGGAGTTGGATTTGATTGATCACCTCACTGATATTATTAGGGCTGAAGAAGGGAATCACGAGGAGACTAATTTTCAAATGGCAAGCTGTACTCTTGAAGCTGGAGTCAAAATTTATTCCTTAAGGGTGGATTCAGTGCATTCCGAGGCATATAAAGTTCTTGCTAGAATGAATAGAGCCGGCCAAGATACTGAGGAAGACACTACTTTAGGGAGTGTTAATGCTGAAAGTGGTCAAGCAAGCAGGAAGGAAGTTGACAAAAAGTTGTCGCCTTTGTCAACATTGGAATCGTCTTTTGAGGTTCTTAATGTAAAGAAGTTTGATGTTGCATTTGCTGTGGATCCACTCTATCGCCAGACATCAGCACAATTTGATGAAGGTGGAGCTAAAGGCCTTTTGATGAATAATCTTGGTGTATATGGTAGATGTAGGATGCTCTTTGATTCACTAGAAGTGCCAGGGAAGTGCATAACCAGTCAAAATGAACGTGATATTTCAGATACAATTGATCTTTCTTTCGCCAGAGATTGTGTTGAACAGATGATATTGGACATGCATACGAAGGATAAAATCTCTCCAACTCTCAGGGTGATAGTAAATCAATTTGACGAAAATAATAAAAGGCCTTCTGATTTTCAATCTTCTGCCGAGAAATCAGCTGAAGAGTTTGATGCAGCTATTGATTGTGAACTTGCCACTGAAAAAGAAGAATATGAGAACTTCCCATCCTGGAGAAATGATCATGATAACGAAGCATTTCCTGCTGAATGGGGCTCTGATGACGCAGACCCAATTTTTCCAAGTTACCATCAGGAAAAAGAACCTTTTCATTCCCAAGACCCTCCTGATATGGATGACATATTTGAAAATGTTGATGGGTATTTGTTTTTGAGTCTGGGCTTTAGGTCAAAGAAAAATGCATGGGCAGGCCCTGATCATTGGAAGTATCAAAAAGCTGAAGGCTCAAAGTCAGAGGTTCATCGTTCTTCTGAGGATGGGTTGATCCAGAAAACCAGGCAGCCAAGGACAAAGAGACAGGTTGAAGTTGATTTAGATTTCACAAGTTTTCTCGAGAAAAAAATACCCAATATCTTTTCTCCTCCCAGGAATCCCAAATCATTACAGCTCCCTGAAAATATGCCACCTTGCGTTACAAAACTTCCAGAGGACTGCCACTATGAACCAGAGGATCTTCTCAAGTTATTTCTTTTGCCTTGTGTAAAGTGCATTGGGAGGAGGGCGAGAAAGCTCTCAGGTGAATTTGCAGATGTATCAGGAGAACAATGCAATAACTATGAATCATTCCCTTCCTGGGATAATGGAAGTGTTTGTGATGGTGATGTTCCTGATGTAAATAGTGACATGGATGACTCTAGTACACTTATTTCTCAGCCTCGTCAGATCAATAAAATTGAAGTCCAGTATGACAAAACATCGAAACAAGTCAATGTTCAGGCTCTGAAAATAACACTTTGGGACCATATTCAAGTTCCGATTCAGGGTAAAAAAGAAATGGTATCTTTCAGGCATATGTTGACCAACTTTCCTAGTAAATGCAATGCTGCTGCAACTATTAGTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTAATGAGAAAGGGTTGAGCATCCAAAGCTGCCCCAACTTGGATGATCTTGGCATATGCCTACCTGATGATGATGCCACTATCACCGGAACAGTTTAG 2013 0.4257 MAETLSPNPTTGHKKRVPMSARIQSPTSAFFVGSNDDQLERAQARAARAAAIRRNSLAANFHSQPPTSHPCLNKHQILDLFHNCIKLASENKINQKNTWELDLIDHLTDIIRAEEGNHEETNFQMASCTLEAGVKIYSLRVDSVHSEAYKVLARMNRAGQDTEEDTTLGSVNAESGQASRKEVDKKLSPLSTLESSFEVLNVKKFDVAFAVDPLYRQTSAQFDEGGAKGLLMNNLGVYGRCRMLFDSLEVPGKCITSQNERDISDTIDLSFARDCVEQMILDMHTKDKISPTLRVIVNQFDENNKRPSDFQSSAEKSAEEFDAAIDCELATEKEEYENFPSWRNDHDNEAFPAEWGSDDADPIFPSYHQEKEPFHSQDPPDMDDIFENVDGYLFLSLGFRSKKNAWAGPDHWKYQKAEGSKSEVHRSSEDGLIQKTRQPRTKRQVEVDLDFTSFLEKKIPNIFSPPRNPKSLQLPENMPPCVTKLPEDCHYEPEDLLKLFLLPCVKCIGRRARKLSGEFADVSGEQCNNYESFPSWDNGSVCDGDVPDVNSDMDDSSTLISQPRQINKIEVQYDKTSKQVNVQALKITLWDHIQVPIQGKKEMVSFRHMLTNFPSKCNAAATISDISPHLCFICLLHLANEKGLSIQSCPNLDDLGICLPDDDATITGTV 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03684 670 MobiDBLite consensus disorder prediction 160 185 - -
Pumo4g03684 670 PIRSF Condensin_H 264 556 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 PIRSF Condensin_H 4 275 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 PIRSF Condensin_H 547 662 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 MobiDBLite consensus disorder prediction 1 20 - -
Pumo4g03684 670 PANTHER CONDENSIN COMPLEX SUBUNIT 2 16 661 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 Pfam Condensin complex subunit 2 25 513 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 Pfam Condensin complex subunit 2 549 657 IPR022816 GO:0000796|GO:0007076
Pumo4g03684 670 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03684 Pumo-Chr4 76455959 76460375 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03684 K06676 - gmx:100777082 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03684 4 76455959 76460375 Pumo4g03684 4 76455959 76460375 ECH
Pumo4g03684 4 76455959 76460375 Pumo11g01232 11 41809501 41813824 PCT