Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01232 ATGGCGGAAACCCTAAGTCCCAATCCCACGATGGGTCAGAAGCAGAGGCTCCGCATCCAGTCCCCGACCAGCCCCTTCTTCCTGGGCTCCAACGACGACCAGCTCGAACGCGCCCAGGCACGCGCCGCACGCGCCGCCGCCATCCGCCGCAAGAGCCTCGCCCTCAACCAGCCACTTCAGGCCAATTCCGACCCCTGCCTCAACAAACAGCAGATCCTCGATTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAGAACACGTGGGAGTTGAACTTGATTGACCACCTTACCGATATCATCAAGGCCGAAGAAGAAAATGACGCGGAGACTAATTTTCAAAAAGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGTGGGATGAATAGAGCAGGCCAGGAAGCTGAGGAAGACACTACCTTGGATGGTGTTAATATTGAAAGTGGACAAGAAGAAAGCAGGAAAGAAACGAGCAAAAAGGTCTGTGGTCTTTGGATCGATGGACTTGACTGGTTAAACATTTTGCTTAGTTTTAAGAGTTGTTTTTTCATGCAGTTGTCACCTTTGTCAACATTGGAATCATCTTTCGAGGCACTTAATGTAAAGAAGTTTGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGGGCCAAGGGTCTTTTAATGAATAATCTCGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACAAGAAGTGCCTGCGAAGTGTATGGCAAGCCAAAATCAATCTGATATTTCAGATACTATTGATCTTTCTTTTGTCAAAGATTGTATCGAGCAGATGGTGTTGGACATGCATGTGAAGGATGAAATTTCTCCAACTCTCAGGACTATAGTAAACCGATTTGATGAAAGTAACAAAAGGCCCACTGATATTCAACTTCATGGCCAGAATTCAGCTGAAGATCTTGATAATGCTGATAATAATGAAAATGGTTTTGATAGAGAAGAATATGAGAACTGCACGGCGTGGAGTGATGATCATGATGACCAAACAGTTGTTGCTGATCTAGGCTATAATGATGCAGATCCAAGTTTTCCCAGTTACCCTCAGGACAATGATGAGCCATTTCCTTCCCCAGAAGCTGATATGGATGACAGATTTGAAAATGTTGACGGGTATTTATTTTTGAGTCTGGGTTTTAGTTCTAAACAGAACGCATGGGCAGGCCCTGATCATTGGAAGTATAGAAAATCTAAAGTCTCAGAGGTTCATCCTACTTCTGAAGATGGGTCGAGCCTAAAAAGTAGGCAGCCAAAGAGTAAGAGACAGGCTGAAGTTGATTTAAATTTCACAAATTCTCTTGAGAAAAAAATGCTAGATACATTTTCTCCTCCCAAGAATCCCAAATTGTTACTGCTCCCCGAAAGCAGATTGCCTTGCAATACAAAACTTCCTGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGTTATTTCTTCTGTCTAATGTGAAGATTGTGTTTCAAGTTCTGGTGTTTTTTGCAGATGGATCTAGAGAACAATCCAATGAATATGAATCATTCCCTTCGTGGGATAATGGAAGTGTTTGTGGGGATGACTCTGGTGACTACGGAGGTGATCTTCATAGTGGCATTGAGGACTCCAACACTCTTATTACTCAGCCTCGTCAGGTCAATAAAATTGAAGTTCAGTATGACAAGACTTCCAAACAAGTTGATGTTCATGCACTAAAAATTACTCTTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTAGAGGGTCAAAAAGATACCTTATCTTTCAGGAATATATTGTCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACAATCAGTGACATCTCTCCTCATTTGTGCTTCATATGTCTACTGCATTTGGCAAACGAGAAAGGATTGAGCATTCAAAACAGCCCCAACTTGGATGATCTTGCCATACGGCTTCCACATGTTGCTGATTCTATAAGGGGAACAGTTTAG 2082 0.4294 MAETLSPNPTMGQKQRLRIQSPTSPFFLGSNDDQLERAQARAARAAAIRRKSLALNQPLQANSDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEEDTTLDGVNIESGQEESRKETSKKVCGLWIDGLDWLNILLSFKSCFFMQLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSQEVPAKCMASQNQSDISDTIDLSFVKDCIEQMVLDMHVKDEISPTLRTIVNRFDESNKRPTDIQLHGQNSAEDLDNADNNENGFDREEYENCTAWSDDHDDQTVVADLGYNDADPSFPSYPQDNDEPFPSPEADMDDRFENVDGYLFLSLGFSSKQNAWAGPDHWKYRKSKVSEVHPTSEDGSSLKSRQPKSKRQAEVDLNFTNSLEKKMLDTFSPPKNPKLLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKIVFQVLVFFADGSREQSNEYESFPSWDNGSVCGDDSGDYGGDLHSGIEDSNTLITQPRQVNKIEVQYDKTSKQVDVHALKITLWDHVQESVKLPLEGQKDTLSFRNILSNFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNSPNLDDLAIRLPHVADSIRGTV 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01232 693 PIRSF Condensin_H 1 296 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 PIRSF Condensin_H 285 565 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 PIRSF Condensin_H 567 684 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 MobiDBLite consensus disorder prediction 327 352 - -
Pumo11g01232 693 MobiDBLite consensus disorder prediction 376 403 - -
Pumo11g01232 693 MobiDBLite consensus disorder prediction 439 464 - -
Pumo11g01232 693 MobiDBLite consensus disorder prediction 155 174 - -
Pumo11g01232 693 PANTHER CONDENSIN COMPLEX SUBUNIT 2 18 684 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 Pfam Condensin complex subunit 2 573 681 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 Pfam Condensin complex subunit 2 24 529 IPR022816 GO:0000796|GO:0007076
Pumo11g01232 693 MobiDBLite consensus disorder prediction 330 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01232 Pumo-Chr11 41809501 41813824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01232 K06676 - gmx:100799781 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01232 11 41809501 41813824 Pumo11g01232 11 41809501 41813824 ECH
Pumo4g03684 4 76455959 76460375 Pumo11g01232 11 41809501 41813824 PCT