Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03677 ATGGCCAACCAAGGACATGACCTCCCTCTCTATGAAAAAGTTTGGCTCAAGCGCAGGTTTCAAAGAGTGATAGATACCTTGATTTTAGTCCTCCTACTCTTGCTTCTTAGCTACCGTGTTTTCTCATCCAACAGCTTCACTTTCCCATGGTTCCTTGCTTTCTTATGCGAATCTTGGTACACCTTCACTTGGATTGTGATTCTCAACTCCAAGTGGAGTCCTGCAGTAACCATAACCCACCCAGATCGACTCTTGCAACGGGTACCTGAGCTTCCAAGAGTAGATTTGTTTGTGACAACAGCAGACCCTGTACTTGAACCACCAATCATCACAGTCAACACTGTCTTGTCTCTTATAGCGCTTGATTATCCCACTAGCAAGTTAGCTTGCTATGTTTCTGATGATGGTTGTTCCCCTCTTACTTTTTATGCCCTTGTGGAAGCCTCCAAATTCGCTAAACTTTGGGTACCTTTCTGTAAGAAGTACAACTTGCAAGTTAGAGCACCCTTCAGATACTTCTCTGACTTTGTCACTAACAAAAGTGAAGAGTCACTTGAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATCACAATCTTAGCCAAAAAATTGAAGAGGTGACACGCAAAACAATTCCATTCCAACCTGATGGAGAATTTGCAGTTTTCTCAAATACAGACCAAAGAAATCATCCATCCATAGTAAAGGTTATAATGGAGAACAAGGATGGTCTTTTTGATGGGTTGCCTCAGTTAATCTATGTATCCAGAGAGAAGAGGCCACAGTATCATCATAATAATAAAGCCGGAGCCATGAATGTCTTGACAAGAGTTTCAGGGTTGATGACCAATGCTCCTTTTATGTTGAATGTAGACTGTGACATGTTTGTGAACAATCCGAAGATTGTTCTACACGCTTTGTGCATTTTGATGGATTCACAAAGAGGAAAAGAAGTTGCTTTTGTTCAGTGTTTCCAACAATTCTACGATGGAATAAAAGATGACCCTTTTGGAAATCAGTGGGTTATTGCATTTGAGTACATTATTCGGGGCATGGCAGGACTTCAAGGACCTTTCTATGGAGGAACAAACACCTTCCTTAGAAGAAATGCTATTTATGGTCTTTATCCTGATGAAATTGAAAGCGGGAGAAAAGGAAAATTAGAAGAAAAGATATTAATACGACAATTTGGAAGTTCAAAGGAGTTTATCAAATCAGCAGCTCATGCTTTGGGAGGGAGTGCATATTCTGCTAATGATATTACTCCTTCCTACTTTATTGAGGCAGCAACCCAAGTTGCTAATTGTGAATGTGAAGATGGCGCTTTCTGGGGTGAACAGGTACGGAACAGAAATAAATATATTGTTCAGACAAAATTAACTATTTTCTCAAAAACATAA 1404 0.3967 MANQGHDLPLYEKVWLKRRFQRVIDTLILVLLLLLLSYRVFSSNSFTFPWFLAFLCESWYTFTWIVILNSKWSPAVTITHPDRLLQRVPELPRVDLFVTTADPVLEPPIITVNTVLSLIALDYPTSKLACYVSDDGCSPLTFYALVEASKFAKLWVPFCKKYNLQVRAPFRYFSDFVTNKSEESLEFKQEWLQMKDMYHNLSQKIEEVTRKTIPFQPDGEFAVFSNTDQRNHPSIVKVIMENKDGLFDGLPQLIYVSREKRPQYHHNNKAGAMNVLTRVSGLMTNAPFMLNVDCDMFVNNPKIVLHALCILMDSQRGKEVAFVQCFQQFYDGIKDDPFGNQWVIAFEYIIRGMAGLQGPFYGGTNTFLRRNAIYGLYPDEIESGRKGKLEEKILIRQFGSSKEFIKSAAHALGGSAYSANDITPSYFIEAATQVANCECEDGAFWGEQVRNRNKYIVQTKLTIFSKT 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03677 467 Pfam Cellulose synthase 94 381 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo4g03677 467 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 9 452 - -
Pumo4g03677 467 FunFam Cellulose synthase-like protein H1 223 382 - -
Pumo4g03677 467 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 216 381 IPR029044 -
Pumo4g03677 467 SUPERFAMILY Nucleotide-diphospho-sugar transferases 108 376 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03677 Pumo-Chr4 76325314 76328171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03677 8 446 Glycosyltransferase AT4G15320 48.107 1.54e-138 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03677 - - gmx:100795671 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03677 4 76325314 76328171 Pumo4g03677 4 76325314 76328171 ECH
Pumo4g03677 4 76325314 76328171 Pumo11g01227 11 41721282 41728365 PCT