Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01227 ATGGCCACCCATTTATTTGTTATAAATACACCTTGTTTGATTGTCATCATATTCACACACAGTTTTCTTATCACCTTAGCTCAAATCAATATGGCCAACCAAAACTCTCTCCCCCTCTATGAAAAACACTGGTACAAGCACAATTATAAAAGGGTAACAGATAGCTTGCTTTTAATCCTCCTCTTATTGTTGCTTGGTTACCGCATTATCTCTGTCAACAACTACTCTATCCCTTGGTTTGTTGCCTTTTTGTGCGAATCATGGTTCACCATCTCTTGGTTTTTCACCCTCACCACTCAGTGGAACCCGGCAGTAATCAAAACCTACCCAGAGCGTCTCTTGCAAAGTGTGCAAGAGCTTCCACCAGTGGACTTGTTTGTGACAGCAGCAGATCCTGAGCTTGAACCACCCATTATCACAGTGAACACTGTGTTGTCTCTGTTGGCACTTGATTACCCAGCTCACAAGCTAGCTTGTTATGTTTCTGATGATGGCTGTTCCCCTCTTACCTTCTATGCTCTTCAGGAAGCCTCTAAATTTGCAAAGTTTTGGCTACCTTTCTGTAAGAAGTATGAGGTGCAAGTTAGAGCTCCATTCAGATACTTCTCTGACAAACCTGAGGTCTCCACGGCCACTAACACACCAGAATTCAAACAAGAATGGTTACAAATGAAGGATATGTATGATAATCTTAGCCGCAGAATAGAATTGGATGCATCAAGAAAATCTAATCTATGTCATGGAGAGTTTGCGGCTTTCTCAAACACTGAGAGGACAAATCATCCATCCATAATCCAGGTTATATGGGAGAACAAGGAACACCTTGCAGATGGGTTGCCGCATTTGATTTACATATCTAGAGAGAAGAGGTCAAAACAGCCTCATCATTACAAAGCCGGTGCCATGAATGTGTTGACAAGAGTCTCAGGACTGATAACCAATGCTCCCTTTATGCTGAACGTGGATTGTGACATGATTATAAATAATCCAAAGATCGTTCACCATGCGTTGAGCATTTTGCTTGATCCCAAAGGAGAAAAAGAAGTTGCATTTGTTCAATTTCCCCAACAATTCTATGCTACATTGAAGGACGATCCTTTTGGAAATCAAATGGCAATTTTAATTAAGTACATGGCGGCTGGATTAGCTGGACTCCAAGGACCTTTCTATGGGGGAACAAACTGCGTTCATAGAAGAAAAGTTATTTATGGTCTTTCTCCAGATAACATTGTAAAGGGAAACTGCATGCCAGAGGACGAATTAAAACAAAAATTCGGAGCTTCAAAGGAGATTATGAAATCAGCTGCTTATGCTTTGGAAGGGAGAACATATTCGTCTAATGATATTAATATTTCGAACGTTGTTGACGTAGCAAGCCAAGTTGCTGGTTATGGATATGAATATGGCACCGGATGGGGCAAGCAGGTGGGTTGGATATATGGATCAGTAACAGAGGATGTGCTCACCGGGCTGACAATACATGGAAAAGGTTGGAGATCAGAATTGTGCACACCGAGCCCAATTGCCTTCACAGGTTTCGCTCCAGGAGGTGGCCCAACTTCAATGGCTCAACAAAAGAGATGGGCCACAGGACTGCTTGAGATCTTCTTTTGCAAGCATTGTCCTATTATTAGCACCCTTTTTCGTAAGCTTAGTTTAAGGCAATGCATAGCATATATGTGGATTATCAATTGGGGCATGCGACCAGTCTTTGAAGTATGTTATGCCTGTCTCCTTGCATATTGCATCATCACCAACTCCAATTTCTTGCCCCAGGACCTAGGTATGTGTATTCCCGTTGCTTTTCTCGTAATATACAAGATATATACTGTATCAGAATATTTGGCAGAAGGGCTATCAATTCGAGCATGGTGGAACAATCAAAGAATGTCAAGAATAACACCCATGAATGCTGGCTTTTGTGCATTTCTTAGTGTCCTACTTAAGTTGTTAAGAATATCTGAAACTGTGTTTGACATAACAAAGAAAGATTTGCCCCCAGCTGAGGATGTTGGAGATGATAATAAGGATGCTGGAAGGTACACCTTTGATGAGTCCCTAGTTTTCTTACCGGGCACTACCATTTTGTTGTTGCAATTGACAGCAATGGTTATCAAGTTATTAGGGTTGCAACCACCAGTGCCAACTCAGAGTGGGAATGGGTGTGGACTAGAAGGACTATTGCTGGTTGATGAGGTTTAG 2202 0.4178 MATHLFVINTPCLIVIIFTHSFLITLAQINMANQNSLPLYEKHWYKHNYKRVTDSLLLILLLLLLGYRIISVNNYSIPWFVAFLCESWFTISWFFTLTTQWNPAVIKTYPERLLQSVQELPPVDLFVTAADPELEPPIITVNTVLSLLALDYPAHKLACYVSDDGCSPLTFYALQEASKFAKFWLPFCKKYEVQVRAPFRYFSDKPEVSTATNTPEFKQEWLQMKDMYDNLSRRIELDASRKSNLCHGEFAAFSNTERTNHPSIIQVIWENKEHLADGLPHLIYISREKRSKQPHHYKAGAMNVLTRVSGLITNAPFMLNVDCDMIINNPKIVHHALSILLDPKGEKEVAFVQFPQQFYATLKDDPFGNQMAILIKYMAAGLAGLQGPFYGGTNCVHRRKVIYGLSPDNIVKGNCMPEDELKQKFGASKEIMKSAAYALEGRTYSSNDINISNVVDVASQVAGYGYEYGTGWGKQVGWIYGSVTEDVLTGLTIHGKGWRSELCTPSPIAFTGFAPGGGPTSMAQQKRWATGLLEIFFCKHCPIISTLFRKLSLRQCIAYMWIINWGMRPVFEVCYACLLAYCIITNSNFLPQDLGMCIPVAFLVIYKIYTVSEYLAEGLSIRAWWNNQRMSRITPMNAGFCAFLSVLLKLLRISETVFDITKKDLPPAEDVGDDNKDAGRYTFDESLVFLPGTTILLLQLTAMVIKLLGLQPPVPTQSGNGCGLEGLLLVDEV 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01227 733 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 38 706 - -
Pumo11g01227 733 SUPERFAMILY Nucleotide-diphospho-sugar transferases 140 557 IPR029044 -
Pumo11g01227 733 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 251 411 IPR029044 -
Pumo11g01227 733 FunFam Cellulose synthase-like protein H1 252 411 - -
Pumo11g01227 733 Pfam Cellulose synthase 414 706 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo11g01227 733 Pfam Cellulose synthase 123 410 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01227 Pumo-Chr11 41721282 41728365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01227 38 724 Glycosyltransferase AT2G32540 46.414 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01227 - - gmx:100500469 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01227 11 41721282 41728365 Pumo11g01227 11 41721282 41728365 ECH
Pumo4g03677 4 76325314 76328171 Pumo11g01227 11 41721282 41728365 PCT