Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03659 ATGGGCTCAGCGGAGAAAGAGCCACTGATAACAGCGTCTTCTACGAACGACGGAACTCCAATTCCTCGATCAAGTTCAAAGCACGAGTCCGATGGGGAACTTGAGAGAATTCTCTCAGACGACACCGTTCCGTTCCTCAACCGTGTGGGACCCGCCACGTGGATCGAGTTGAAGCTCCTCTTCTACCTCGCCGCCCCCGCCGTCGTTGTCTACCTCATCAACTACGTCATGTCCATGTCCACCCAAATCTTCTCCGGCCACCTCGGTAACCTCGAACTCGCCGCCGCCTCCCTCGGCAACACCGGCATCCAAATCTTCGCTTATGGCCTCATGTTGGGTATGGGGAGTGCCGTTGAGACACTATGTGGACAAGCCTTTGGTGCTCAAAAGTTTGAGATGCTAGGGATATACGTGCAAAGGTCAACGGTTCTTCTTTCATTAGCTGGCGTAGTTTTGACCGTAATATACGTCTTCAGCGAACCCATTTTAATATTCCTCGGGGAATCGCCAAGAATCGCGTCTGCTGCAGCGCTCTTCGTGTACGGGCTCATCCCTCAGATCTTCGCTTACGCTGCGAACTTCCCCATTCAGAAGTTCCTCCAAGCGCAGAGCATAGTGGCCCCTAGCGCGTACATCTCAGCCGCGACGCTGGTGGTCCACCTGGTGCTGAGTTGGGTCGCGGTATACAAGATTGGGCTGGGCCTGTTGGGCGCGTCGCTGGTGCTGAGCCTGTCGTGGTGGATCATCGTCATTGCTCAGTATCTGTACATCGTCACGAGCGAGAGGTGCAAGCGCACGTGGCGGGGGTTCACGTGGCAAGCGTTTTCGGGTTTACCCGGGTTCTTCAAGTTGTCCGCTGCGTCCGCGGTGATGCTGTGCCTCGAAACGTGGTACTTTCAGATTCTGGTTTTGCTCGCGGGGCTTCTTCCTCAACCTGAGTTGGCTCTTGATTCCCTTTCTATTTGTACCACAGTTTCTGGATGGGTTTTCATGATCTCTGTTGGATTCAACGCAGCCGCAAGCGTGAGAGTGAGCAATGAACTAGGAGCAAGAAATCCAAAATCAGCGTCGTTTTCGGTGGTGGTGGTGACAGTGATTTCTTTCATAATATCAGTAATTGCAGCACTGGTGGTTCTTGCATTAAGGGATGTCATTAGCTATGCCTTCACAGGGGGTGAAGAGGTTGCTGCTGCAGTTTCAGATCTTTGCCCACTCCTTGCTCTTTCTCTTGTCCTCAATGGCATTCAACCCGTCTTATCTGGGGTGGCTGTTGGATGTGGATGGCAAGCTTTCGTAGCTTATGTAAACGTGGGTTGTTATTATGGAGTTGGCATACCATTGGGTGCGGTTCTCGGCTTTTACTTCAAATTTGGTGCCAAGGGAATATGGCTGGGAATGCTAGGTGGCACCGTTATGCAAACAATTATTCTAATGTGGGTCACATTTAGAACGGATTGGACTAAGGAGGTGGAGGAAGCAGCCAAGAGGCTGAACAAATGGGAGGACAAGAAGGAACCACTACTAAATTGA 1530 0.5176 MGSAEKEPLITASSTNDGTPIPRSSSKHESDGELERILSDDTVPFLNRVGPATWIELKLLFYLAAPAVVVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAQKFEMLGIYVQRSTVLLSLAGVVLTVIYVFSEPILIFLGESPRIASAAALFVYGLIPQIFAYAANFPIQKFLQAQSIVAPSAYISAATLVVHLVLSWVAVYKIGLGLLGASLVLSLSWWIIVIAQYLYIVTSERCKRTWRGFTWQAFSGLPGFFKLSAASAVMLCLETWYFQILVLLAGLLPQPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVVVVTVISFIISVIAALVVLALRDVISYAFTGGEEVAAAVSDLCPLLALSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYGVGIPLGAVLGFYFKFGAKGIWLGMLGGTVMQTIILMWVTFRTDWTKEVEEAAKRLNKWEDKKEPLLN 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03659 509 CDD MATE_eukaryotic 56 492 IPR045069 GO:0042910|GO:1990961
Pumo4g03659 509 Coils Coil 483 503 - -
Pumo4g03659 509 MobiDBLite consensus disorder prediction 1 33 - -
Pumo4g03659 509 PANTHER MULTIDRUG RESISTANCE PROTEIN 52 486 - -
Pumo4g03659 509 Pfam MatE 66 226 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g03659 509 Pfam MatE 288 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo4g03659 509 MobiDBLite consensus disorder prediction 8 23 - -
Pumo4g03659 509 NCBIfam MATE family efflux transporter 66 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03659 Pumo-Chr4 75883827 75890545 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03659 K03327 - gmx:100795338 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03659 4 75883827 75890545 Pumo4g03659 4 75883827 75890545 ECH
Pumo4g03659 4 75883827 75890545 Pumo11g01200 11 41383962 41392016 PCT