Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01200 ATGGGTTCTACATCAGTGCACAAGGATGTTGATGAACCTTTGCTGGTCTCAAACGAAGCATCGCCACAAGCACCTTCTTTTACTGAATCATTGAGCTCAAACTCGAAGCATGGATCAGATGGTGAACTTGAGAGAATACTGACAAACACCAGCGTCCCTTTCATGAAGCGTTTAGGAGCCGCAACATGGGTGGAATTAAAGCTCTTGTTTCACTTGGCTGCCCCTGCTGTTATCGTGTACCTTATCAACTATGTCATGTCCATGTCCACACAAATCTTTTCAGGCCACCTCGGTAACCTCGAACTTGCTGCTGCTTCCCTTGGAAACACTGGCATCCAAGTCTTCGCTTATGGCCTCATGTTGGGAATGGGGAGTGCTGTTGAGACACTATGTGGACAAGCATATGGTGCCACAAAGTTGGAGATGTTAGGCATATACTTGCAAAGATCAACGGTGCTTCTGACACTAGCAGGCATTCTTCTAACCATCATATACATCTTCTCCGAGCCCATTCTAATCTTCCTAGGAGAATCCCCAAGAATCGCATCCGCAGCAGCACTTTTCGTCTATGGCCTAATCCCTCAAATCTTCGCCTACGCCGTTAACTTCCCCATTCAAAAATTCCTCCAAGCCCAGAGCATAGTGGCTCCAAGTGCGTACATTTCAACAGCAACGTTGTTGATCCACCTCGTGTTGAGTTATGTGGTGGTGTACAAAGTGGGGCTTGGTCTGTTGGGTGCGTCTTTGGTGTTGAGTGTTTCGTGGTGGATCATTGTGATTGCGCAGTTTGTGTACATTGTCAAGAGTGAGAGGTGCAAGCACACGTGGAGAGGGTTCAGTTTTCAAGCGTTTTCGGGGTTGCCAGAGTTTTTTAAACTGTCTGCAGCATCGGCGGTGATGCTGTGCCTAGAGACGTGGTACTTCCAAATTTTGGTTCTCCTTGCGGGGTTGCTTCCTCACCCTGAGTTGGCTCTCGATTCCCTTTCTATTTGTACCACAGTGTCTGGATGGGTTTTCATGATCTCAGTTGGATTTAACGCAGCTGCAAGTGTGAGAGTGAGCAATGAACTAGGGGCAAGAAATCCAAAATCAGCATCATTTTCGGTGGTGGTGGTGACATTGATTTCTTTCATAATATCGGTGATTGTAGCAGTGGTGGTGCTGGCAATACGAGATATCATTAGCTATGCTTTCACAGACGGTGAAGAGGTGGCTGCTGCTGTCTCAGATCTTTGTCCCCTCCTTGCTCTTTCTATTGTCCTCAACGGCATTCAGCCTGTCTTATCTGGGGTAGCCGTTGGATGTGGATGGCAAACTTTTGTTGCGTATGTGAACGTTGGTTGTTATTATGGAGTTGGCATACCATTCGGTTCGGTTCTCGGTTTCTATTTCAAACTCAGTGCTAAGGGAATATGGTTGGGAATGCTAGGTGGCACGGTTTTGCAAACAATTATTTTAGTGTGGGTCACATTTCGAACGGATTGGAGTAAAGAGGTTGAAGAAGCAGCAAAAAGGTTGAACAAGTGGGAGGACAAAACGGAGCCACTTGTCAACAACTGA 1560 0.4667 MGSTSVHKDVDEPLLVSNEASPQAPSFTESLSSNSKHGSDGELERILTNTSVPFMKRLGAATWVELKLLFHLAAPAVIVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQVFAYGLMLGMGSAVETLCGQAYGATKLEMLGIYLQRSTVLLTLAGILLTIIYIFSEPILIFLGESPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVAPSAYISTATLLIHLVLSYVVVYKVGLGLLGASLVLSVSWWIIVIAQFVYIVKSERCKHTWRGFSFQAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPHPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVVVVTLISFIISVIVAVVVLAIRDIISYAFTDGEEVAAAVSDLCPLLALSIVLNGIQPVLSGVAVGCGWQTFVAYVNVGCYYGVGIPFGSVLGFYFKLSAKGIWLGMLGGTVLQTIILVWVTFRTDWSKEVEEAAKRLNKWEDKTEPLVNN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01200 519 MobiDBLite consensus disorder prediction 20 37 - -
Pumo11g01200 519 PANTHER MULTIDRUG RESISTANCE PROTEIN 60 495 - -
Pumo11g01200 519 Pfam MatE 75 235 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo11g01200 519 Pfam MatE 297 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo11g01200 519 CDD MATE_eukaryotic 65 501 IPR045069 GO:0042910|GO:1990961
Pumo11g01200 519 Coils Coil 492 512 - -
Pumo11g01200 519 NCBIfam MATE family efflux transporter 75 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo11g01200 519 MobiDBLite consensus disorder prediction 20 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01200 Pumo-Chr11 41383962 41392016 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01200 K03327 - gmx:100801718 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01200 11 41383962 41392016 Pumo11g01200 11 41383962 41392016 ECH
Pumo4g03659 4 75883827 75890545 Pumo11g01200 11 41383962 41392016 PCT