Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03592 ATGGTCAACAGTGAGGTTTCTACACGTCTTGAGGGAAAATATGCTGCAATTGTGGTCTGTTGGCTTCTTGGCAATGGATGTCTTTTCTCATGGAACAGTATGCTGACAATAGAAGATTACTACATTGACTTGTTTCCGAAATACCACCCCTCTAGGGTGCTTACTCTTGTGTATCAGCCATTTGCAGTTGGAACACTTGCGATACTGGCGTATAATGAGGCCAAACTCAATACACGACTAAGGAATCTGTTTGGATATATACTGTTTTTCATAAGCACTTTGTTGGTGTTAATTTTGAATTCAGCAACATCTGGTAAAGGAGGGCTTGGAACTTTCATCGGTATATGCGCACTTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGAAACCAGAATTCATTCAGTCCTTCCTTGCTGGTTTGGCAGCATCTGGTGCATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTCCGCAAAGGAGCCATTCTTTTCTTTGCCATATCAACATTCTTCGAGCTTCTTTGTGTTGTTCTCTATGCATTTATTTTCCCTAAAATACCAATTGTGAAGTACTACCGTTCAAAGGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCAGCTGGTGGCATCCGGACATTACCTGGAACAGACACAGAATATACAAAAGATCCAGAGCGGAAGGGAAACAAGCAATTGTTATTGGAAAACATTGATTATGCACTTGATATGTTCCTAATCTATATGCTAACATTGTCTATTTTCCCTGGATTCCTGTCAGAAGATACTGGATCACATAGTTTAGGCACGTGGTATGCTCTCGTTTTAATTGCTATGTACAATGTGTGGGATCTGATTGGAAGATACATTCCACTATTGAAATGCTTGAAGTTGGAGTCTCGAAAGTTGATCACAATAGCAATTCTTAGCCGTTTCTTACTTGTGCCAGCATTTTATTTCACTGCCAAGTATGGTGACCAAGGCTGGATGATAGTGTTAACGTCCTTCTTGGGGCTATCCAATGGTTATTTAACTGTCTGTGTTCTAACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTGTGGTTAATAGGTAAAGGGTGGTGA 1245 0.4145 MVNSEVSTRLEGKYAAIVVCWLLGNGCLFSWNSMLTIEDYYIDLFPKYHPSRVLTLVYQPFAVGTLAILAYNEAKLNTRLRNLFGYILFFISTLLVLILNSATSGKGGLGTFIGICALSGAFGVADAHVQGGMVGDLSYMKPEFIQSFLAGLAASGALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELLCVVLYAFIFPKIPIVKYYRSKAASEGSKTVSADLAAGGIRTLPGTDTEYTKDPERKGNKQLLLENIDYALDMFLIYMLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVWDLIGRYIPLLKCLKLESRKLITIAILSRFLLVPAFYFTAKYGDQGWMIVLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03592 414 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 7 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 PIRSF ENT 3 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 SUPERFAMILY MFS general substrate transporter 19 407 IPR036259 -
Pumo4g03592 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 349 365 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 150 170 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 122 144 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 386 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo4g03592 414 Pfam Nucleoside transporter 124 408 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03592 Pumo-Chr4 74721096 74725553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03592 3 412 Organic Solute Cotransporters AT4G05120 70.732 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03592 K15014 - gmx:100798899 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03592 4 74721096 74725553 Pumo4g03592 4 74721096 74725553 ECH
Pumo4g03592 4 74721096 74725553 Pumo11g01140 11 40002972 40012981 PCT