Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01140 ATGGCTACTTCCACCACTCTATCCCTAGCAACCCCTTCACAACTATGTTCCAAGAAAAGTGGGATCTTTTGTCCTTCTCAAGCAATACTTGTGAAACCAATGAAGAGGCAAATGATGGGGAAGGGAGTGAGAATAAGTTGCCAGGCTACTAGCATTCCTGCAGATAGAGTCCCAGACACGGGGAAAAGACAACTCATGAACCTGCTTCTTCTTGGTGCTATTTCACTCCCTACTGCTGGAATGCTCATCCCATACACCTATTTCTTTGTACCTCCAGGGACAGGATCTTCTACTGGTGGTACTATAGCCAAGGATGCCGTTGGAAATGATGTAATCGCAGAGAAATGGCTCGAGACACATGGACCTGGGGACCGCACACTTACACAAGGATTGAAGCTGAGAACAAGTTCATTTGCCCCTGCCATGGGTCCCAGTACAATGACCAAGGAAGAGTTGAGAGGACCTGCTCCCCTGTCTCTGGCATTGGCACATTGTGATGTGACTGATGGGAAAGTGGTGTTTGTTCCTTGGGTTGAAACAGATTTCAGAACAGAGGTTGATACAAGCGAAGAATCTAAGGCAGCCATGGAGAACAATGAGCCTCCAAGGCGTGTTGAGGGAAAATTTGCTGCAATGGTAGTCTGCTGGCTTCTTGGAAATGGGTGTCTTTTCTCGTGGAACAGTATGCTGACTATAGAAGATTACTATGTTTACTTGTTTCCGAAATACCACCCCTCAAGGGTGCTTACTCTTGTATATCAGCCATTTGCAGTTGGAACACTAGCACTATTGGCTTACAAAGAGGACAGAATCAATACAAGGATAAGAAACCTATTTGGATATACTCTTTTTTTCATAAGCACTCTGTTGATCTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGAATTGGAACTTTTATTGGTATATGCATAATTAGTGGTGCATTTGGAATAGCAGATGCTCATACGCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCTTCCAGAATTCATTCAGTCTTTCCTTGCTGGTGCAGCAGCATCAGGTGCACTAACATCTGCTTTGAGGTTGATTACAAAAGCAGCCTTTGAAAATTCTAAGAATGGTCTTCGCAAAGGAGCCATTATGTTCTTTGCCATATCCACATTCTTTGAGCTTCTTTGTGTTCTTCTCTATGCATTTGTCTTTCCTAAATTACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCTGAAGGATCCAAAACTGTATCAGCTGATCTTGCTGCAGGTGGCATCCAGACCCCAACTGGAAGAGTCAATGAATATGAAAAACAATTAGAGCGCAAAGGAAATAAGCAACTGTTATTGGAAAACATTGATTATGCACTTGATTTGTTCCTAATATATGCGCTTACACTGTCAATTTTCCCTGGATTCTTATCAGAAGATACTGGATCACACAGTTTGGGCACCTGGTATGCTCTTGTTTTAATTGCTATGTACAATGTGTGTGATCTGATTGGGAGATACATTCCACTCTTGAAAATCCTTAAGTTGGAGTCCCGAAAAGTGCTCACCACAGCAATTGTTAGTCGCTTGTTATTTGTGCCAGCATTTTATTTTACTGCAAAGTATGGCACACAGGGCTGGATGATAATGTTGACATCTTTTTTGGGCTTATCCAATGGTTACTTCACAGTTTGTGTTCTCACTTCAGCACCCAAAGGTTACAAGGGACCGGAACAAAATGCCTTGGGAAATTTGTTGGTGTTGTTTCTTCTAGGAGGTATTTTTGCTGGGGTAACACTTGACTGGTTGTGGTTAATAGGGAAAGGGTGGTGA 1830 0.4268 MATSTTLSLATPSQLCSKKSGIFCPSQAILVKPMKRQMMGKGVRISCQATSIPADRVPDTGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGTGSSTGGTIAKDAVGNDVIAEKWLETHGPGDRTLTQGLKLRTSSFAPAMGPSTMTKEELRGPAPLSLALAHCDVTDGKVVFVPWVETDFRTEVDTSEESKAAMENNEPPRRVEGKFAAMVVCWLLGNGCLFSWNSMLTIEDYYVYLFPKYHPSRVLTLVYQPFAVGTLALLAYKEDRINTRIRNLFGYTLFFISTLLILILDLATSGKGGIGTFIGICIISGAFGIADAHTQGGMVGDLSYMLPEFIQSFLAGAAASGALTSALRLITKAAFENSKNGLRKGAIMFFAISTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTPTGRVNEYEKQLERKGNKQLLLENIDYALDLFLIYALTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVCDLIGRYIPLLKILKLESRKVLTTAIVSRLLFVPAFYFTAKYGTQGWMIMLTSFLGLSNGYFTVCVLTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01140 609 FunFam Cytochrome b6-f complex iron-sulfur subunit 48 91 - -
Pumo11g01140 609 SUPERFAMILY MFS general substrate transporter 212 602 IPR036259 -
Pumo11g01140 609 SUPERFAMILY ISP transmembrane anchor 55 92 - -
Pumo11g01140 609 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 198 603 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo11g01140 609 Pfam Nucleoside transporter 318 603 IPR002259 GO:0005337|GO:0016020|GO:1901642
Pumo11g01140 609 Gene3D Single helix bin 47 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01140 Pumo-Chr11 40002972 40012981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01140 198 607 Organic Solute Cotransporters AT4G05120 70.000 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01140 K15014 - gmx:100784933 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01140 11 40002972 40012981 Pumo11g01140 11 40002972 40012981 ECH
Pumo4g03592 4 74721096 74725553 Pumo11g01140 11 40002972 40012981 PCT