Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03578 ATGGAGGTGGAGAGTGAAAATTCAGGGTCTGATGGGAAGGGTTGGAGTTTTTGTAAAATGCCATTTTGGCAAACAACTCACACTCCTTCTTCTTCTTCTTCTTCCTTCATGTCTTACATGCACAATGTTCATCAGCAAAATCAGAATAATGCTCAATCTGTTGATAGATCCAGTCATCATTCTTCAACCACCGTTTCATCTATGGCCAAGTCTCTTCTCCCTACAAGGAGGAGGCTCCGTCTTGATCCTTCCAACAAGCTCTACTTTCCATATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCAGGTGGTATTCTTGCCCCTGGTGAAAGTATAATTGCCACGGTATTCAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAAAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTAAAAGTGCAAGGTGAAATGGACTATGTACCGGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTGCGGGTTATTTTTCTGGACCCTGAAAGGCCTAGTCCTGTCCTGGATAAGCTTAAACGAATGTTGGCTGAGGCCGATGCTGCACTTGAAGTGCGAAAGAAACCGCCGGAGGAGAAAGGTCCTCTAGTAGCTGGGGAAGGCCTTGTTATAGATGAATGGCTCCTTTCTTTTTTCTTTTTCAGTTATGTTTGTGATGTTAAATGCGAGTGA 792 0.4268 MEVESENSGSDGKGWSFCKMPFWQTTHTPSSSSSSFMSYMHNVHQQNQNNAQSVDRSSHHSSTTVSSMAKSLLPTRRRLRLDPSNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVQGEMDYVPELFDEQRDQVAIEQILRVIFLDPERPSPVLDKLKRMLAEADAALEVRKKPPEEKGPLVAGEGLVIDEWLLSFFFFSYVCDVKCE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03578 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 76 209 IPR016763 GO:0005789
Pumo4g03578 263 Coils Coil 258 263 - -
Pumo4g03578 263 MobiDBLite consensus disorder prediction 46 75 - -
Pumo4g03578 263 Gene3D Immunoglobulins 74 204 IPR013783 -
Pumo4g03578 263 FunFam vesicle-associated protein 4-1-like 74 203 - -
Pumo4g03578 263 SUPERFAMILY PapD-like 67 208 IPR008962 -
Pumo4g03578 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 200 IPR000535 -
Pumo4g03578 263 Pfam MSP (Major sperm protein) domain 79 189 IPR000535 -
Pumo4g03578 263 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03578 Pumo-Chr4 74429878 74432913 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03578 - - gmx:100816998 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03578 4 74429878 74432913 Pumo4g03578 4 74429878 74432913 ECH
Pumo4g03578 4 74429878 74432913 Pumo11g01133 11 39861212 39864347 PCT