Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01133 ATGGCGTTGGAGAGTGACAAAACTGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGCATGCCATTTTGGCAAACAACTCATCCTGCTTCTTCATCTTCTTCTTCAACAACAACTTCTTCTATGCATAATAGTGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCCACCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTCTGCTCCCCACAAGGAGAAGGCTCCGTCTTGATCCTCCCAACAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCGCAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATTCTTGCACCCGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAATAATGAGAAACCAATTGATCAGAAAAGCAGGGTTAAGTTTAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTAGCAGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACGCCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGCTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACGGGTCCTCGTGTAGCTGGGGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAAGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 804 0.4478 MALESDKTGSDGKVWSFCSMPFWQTTHPASSSSSSTTTSSMHNSVHHQSQILQSLDRSTHPPSTTVSSVAKSLLPTRRRLRLDPPNKLYFPYEPGKQVRSAIAIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPERPSPALDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLAKQQVEVVDSV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01133 267 Gene3D Immunoglobulins 75 205 IPR013783 -
Pumo11g01133 267 MobiDBLite consensus disorder prediction 28 72 - -
Pumo11g01133 267 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 78 261 IPR016763 GO:0005789
Pumo11g01133 267 ProSiteProfiles Major sperm protein (MSP) domain profile. 79 201 IPR000535 -
Pumo11g01133 267 Pfam MSP (Major sperm protein) domain 80 190 IPR000535 -
Pumo11g01133 267 SUPERFAMILY PapD-like 68 208 IPR008962 -
Pumo11g01133 267 FunFam vesicle-associated protein 4-1-like 75 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01133 Pumo-Chr11 39861212 39864347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01133 - - gmx:100820576 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01133 11 39861212 39864347 Pumo11g01133 11 39861212 39864347 ECH
Pumo4g03578 4 74429878 74432913 Pumo11g01133 11 39861212 39864347 PCT