Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03573 ATGCGGCGAAGAGCGACGGATTTTCGCAGGCCAGTGCGTAGGAGGGTTCCAGATGCGTTGTGGTGGGCATTGTGCTGTGCAGTGATTCTTCTCTTTGTTTATATTCTGAGCAAAGGGAACAAAATTGAGTCCAGACCCGCTTTGTCCAAGAGAACTTACAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGAAGAGATGTTAAGCTCTAACTCAGTCACGAGACAACTCAATGATCAGATATCCCTGGCAAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAATTAAGTGCCGAGATCCACAATTCACAGATGCTCCTCTCAAATGCTGCCACTAGGCGTGTTCCTTTAACAACCAGGGAAACAGAAAGGGCTATCCATGATATGGCATTATTGTTGTACCAGGCCCAGCAGCTCCATTATGATAGTGCAACCATGATCATGAGATTCAAAGCAAAAATTCAAGCTCTTGAGGAACAGATGAATTCTGTTAGTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTTCCAAAAAGCCTGTACTGTCTCGGTGTCCGGTTGACAACAGAATGGTTCAAAAACTTTCATTTGCAAAAGAAATTGAAGGACAAAAGGCATGTGGAGATGAAGCTCAAGGATAACAATCTTTACCACTTTTGTGTTTTCTCGGATAACATTCTTGCAACTTCGGTTGTGGTCAATTCAACTGCAATGAATTCTAAGAATCCCAATATGATTGTTTTCCACCTTGTCACTGACGAAATAAACTATGCTGCAATGAAGGCGTGGTTTGCCATGAATGATTTCCGAGGGGTGACTGTGGAAGTTCAGAAGTTTGAAGACTATACTTGGTTAAATGCTTCATATGTTCCTGTGCTCAAGCAACTTCAAGACTCAGAAATACAGAGCTACTACTTTTCTGGCAACAGTGATGAAGGCAGGACACCAATCAAGTTCCGTAACCCTAAATATCTATCCATGCTTAATCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGCACTAAAGAAGGTGGTGTTCCTGGACGATGATGTTGTGGTTCAGAAGGATCTTTCTGGTCTTTTTTCCATTGATTTGAATGGGAATGTAAATGGAGCTGTTGAAACATGCATGGAGACATTTCATAGATACCATAAATACTTGAACTACTCCCATCCTCTTATACGTGCACATTTTGATCCCGATGCTTGCGGATGGGCATTTGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTAACTGGCATCTACCACTACTGGCAGGAAAAGAATGTAGACCGGACATTGTGGAAACTCGGTACCTTGCCACCTGGACTGTTGACATTTTATGGATTAACTGAGCCCTTGGATCCATCATGGCATGTTTTGGGTTTTGGCTACACCAATGTTGATCCTCAGTTAATAGAGAGAGGAGCTGTACTACACTTCAATGGGAACTCCAAACCATGGTTGAAGATTGGGATTGAGAAGTACAAGCCCCTATGGGAAAAATATGTTGAATACTCTCATCCTTTGTTGCAACAGTGTAACTTTCATTGA 1602 0.4139 MRRRATDFRRPVRRRVPDALWWALCCAVILLFVYILSKGNKIESRPALSKRTYKHDKIMEGLNITEEMLSSNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAEIHNSQMLLSNAATRRVPLTTRETERAIHDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNFHLQKKLKDKRHVEMKLKDNNLYHFCVFSDNILATSVVVNSTAMNSKNPNMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDYTWLNASYVPVLKQLQDSEIQSYYFSGNSDEGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKYVEYSHPLLQQCNFH 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03573 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 65 532 IPR029993 GO:0047262
Pumo4g03573 533 Coils Coil 155 175 - -
Pumo4g03573 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 531 IPR029044 -
Pumo4g03573 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
Pumo4g03573 533 CDD GT8_like_1 228 520 - -
Pumo4g03573 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03573 Pumo-Chr4 74384422 74387986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03573 1 533 Glycosyltransferase AT2G20810 80.037 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03573 K13648 - gmx:100792018 1046.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03573 4 74384422 74387986 Pumo4g03573 4 74384422 74387986 ECH
Pumo4g03573 4 74384422 74387986 Pumo11g01126 11 39780854 39783718 PCT