Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01126 ATGAGGCGAAGAGGTGCAGATTTTCGAAGGCCAGGGAGGAGGAGGCTCCAAGATGTGGTGTGGTGGACAACGTGCAGCGTTGTGCTTCTTTTCTTTATTTATATTCTCACCAAAGGCACCACCAAAATTGACTCCACTCAACAATTCTCCAGGAGAACTTTCAGGCATGACAGGGTTATAGAAGGCTTCAATGTTACAGAAGAGATGTTAAGCCCTGACTCAGTGGCCAGACAAATTAATGATCAAATCTCCCTAGCAAAAGCTTTTGTTGTAATTGCCAAAGAGAGTAATAATCACCAATTTGCTTGGGAGTTAAGTGCTCAGATCCGCATTTCACAGATTTTCCTCTCAAATGCTGCCATTAGGCGTGCTCCTTTAACAATCAAGGAATCTGAACATACTATCCGTGATATGGCATTATTACTATATCAGGCACAGCAGCTCCATTATGACAGTGCAACCATGATCATGAGACTGAAAGGAAAAATTCAAGCCCTTGAAGATCAGATGAATTCTGCAAGTGAGAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCTAAGAGCCTATATTGCCTTGGTGTCAGGTTGACATCTAAATGGTTCAAGAATCTTAGCTTGCAAAAGAGTTTGAAGGACCAAAGACAAGTGGAGATGAAACTCAAGGACAATGATCTTTACCACTTTTGTGTCTTCTCTGATAACATTCTTGCCACTTCAGTTGCGATCAACTCAACTGCAATGAATGCTAAAAATCCAGAGAAGGTTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTTCGTTAAACGATTTCCGAGGGGTGACAGTTGAAGTTCAGAAGTTTGAAGACTTCAGTTGGTTAAATGCTTCATATGTTCCCGTGCTTAAGCAGCTGCAAGACTCAGAGATACAGAACTATTACTTCAAAGGCAACAGTGATGATAGCAAGACCCCAATCAAGTTCCGGAATCCGAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGAGCTGAAGAAGGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGATCTTTTTTCCATTGATTTGAATGGCAATGTTAATGGGGCTGTAGAGACATGCATGGAGACATTTCATAGATACCATAAATATTTGAACTACTCACACCCTCTAATAAGAGCACATTTTGACCCTGATGCCTGTGGATGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGGAATAGGAATGTAACTGGCATCTACCACTATTGGCAAGAAAAGAATGCTGACAGAACATTGTGGAAACTTGTTTTAAAGATCTATGCCAATGTCGACCGAGTTAGGAACTCATTGGCTGTTAACCATTCTTCTTCATAA 1431 0.4102 MRRRGADFRRPGRRRLQDVVWWTTCSVVLLFFIYILTKGTTKIDSTQQFSRRTFRHDRVIEGFNVTEEMLSPDSVARQINDQISLAKAFVVIAKESNNHQFAWELSAQIRISQIFLSNAAIRRAPLTIKESEHTIRDMALLLYQAQQLHYDSATMIMRLKGKIQALEDQMNSASEKSSKYGQIAAEEVPKSLYCLGVRLTSKWFKNLSLQKSLKDQRQVEMKLKDNDLYHFCVFSDNILATSVAINSTAMNAKNPEKVVFHLVTDEINYAAMKAWFSLNDFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFKGNSDDSKTPIKFRNPKYLSMLNHLRFYIPEVFPELKKVVFLDDDVVVQKDLSDLFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVQWRNRNVTGIYHYWQEKNADRTLWKLVLKIYANVDRVRNSLAVNHSSS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01126 476 Pfam Glycosyl transferase family 8 236 454 IPR002495 GO:0016757
Pumo11g01126 476 Coils Coil 156 176 - -
Pumo11g01126 476 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 457 IPR029044 -
Pumo11g01126 476 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 66 454 IPR029993 GO:0047262
Pumo11g01126 476 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 453 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01126 Pumo-Chr11 39780854 39783718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01126 1 454 Glycosyltransferase AT2G20810 78.118 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01126 K13648 - gmx:100792018 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01126 11 39780854 39783718 Pumo11g01126 11 39780854 39783718 ECH
Pumo4g03573 4 74384422 74387986 Pumo11g01126 11 39780854 39783718 PCT