Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03563 ATGGAAACCCCAGTTCTCAGTTACAATACCAATGACACCACCACCACCACCACTAACAATGGCAATTGCACCAGTGACTTTGATATCATTACCTGGTTTGAAGACGTGTCCAAGAACGCCGGTTCTGTTCAGACTCAGACACTCTGCAAGATTCTGAAGCAGAATTGTGGGGTTGAATATCTAAAGAAATGGTTGGGGAGCTACGATATCTCACAAATGGATGCATGTGCCTTGGAATCTCTTTTTACTTCTGTGGTTCCCCTTGCTTCACATGCAGATTTCGAGCCATATATCCAAAAAATTGCAGATGGAGACACAGGTCCTATACTCACACAACAACCCCTAACCACTCTTTCCTTAAGTTCTGGAACCACCGAGGGAAGGCAGAAGTTCGTACCCTTTACCCAGCATAGTGCTCAAACGACCCTTCAAACTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTACCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCAAAACAAAAGGAGGCTTAACAGTTGGAACAGCCACAACACACTACTATGCAAGCGAAGAGTTCAAAACCAAACAGGAGAAAACAAAGGCATTCACTTGCAGCCCCTACGAAGTTATTTCTGGAGGGGACTATAAACAATCCACGTACTGCCACCTCCTTCTTGGCCTCTTCTTCTCTGATCACGTAGAGTTTATATCCTCAGCTTTTGTCTATGGCATAGTGCAAGCGTTTTGCACTTTCGAAGAGGTTTGGAAAGACCTTTGCAATGACATAAAAGATGGCACTTTGAGTTCAAGAATCAAGCTACCCAAAATGAGAGAGGCTGTTTTGGGCATAATCACTCCAAACCCCTCTTTGGCCTCAAAACTAGAAGCCTCTTGCTTGGAGCTACAAGTGGTGGATTGGTTTGGTTTGGTTCCAAAACTTTGGCCAAATGCCAAGTACGTTTATTCCATAATGACAGGTTCTATGCAACCTTACTTGAAAAAGCTTAGGCATTATGCAAATGGGGTGCCACTAATAAGTGCTGACTATGGTTCAACTGAGAGTTGGATAGGGGTTAATGTGGATCTTAGTTTGCCTCCAGAGAAAGTAACATTTGCTGTAGTACCCACGTTCTCTTACTTTGAGTTCATACCACTTTATAGACAGAAACAAGATTGCAGCTCAGTAGCTGATCATGATTTCATGGAAGACGAGCCAATCCCACTATCCCAGGTTAAAGTTGGCCAAGAGTACGAAATAGTGCTCACAACTTTCACCGGGCTGTACAGGTGCAGACTAGGAGACGTAGTGGAAGTGGCAGGTTTTCACAATGGGACCCCAAAATTGAACTTTATATGCAGAAGAAAGCTAATTCTAACCGTGAATATAGACAAGAACACAGAGAGAGACCTTCAACTAGTGGTAGAGAAGGGGTCACAGCTGCTGAACAATGAGGCCAAAGCTGAGCTCGTTGATTTCACAAGCTATGCAGACATCTCAAACCAACCAGGTTGTTACGTCATTTTCTGGGAGATCAAAGGTGAGGCCGAGGATAAGGTACTTGAGGCATGCTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTGGTTTCAAGGAAAACCAGTTCAATAGGGCCTTTGATGCTTTGCATTGTAGAGAGAGGCACTTTTAGAAAGATTTTGGATTATTTCGTGGAGAATGGGGCAGCACTGGGCCAGTTCAAGACCCCTAGGTGCACCAACAACCCGGTCCTCCTCAAAATTCTTAGTGCATGCACCATTAAAACATTTCGCAGCACTGCTTATAGTTCAATCCACTCATGA 1839 0.4421 METPVLSYNTNDTTTTTTNNGNCTSDFDIITWFEDVSKNAGSVQTQTLCKILKQNCGVEYLKKWLGSYDISQMDACALESLFTSVVPLASHADFEPYIQKIADGDTGPILTQQPLTTLSLSSGTTEGRQKFVPFTQHSAQTTLQTFTLAAAYRSRVYPTREGGRILEFIYSSNQFKTKGGLTVGTATTHYYASEEFKTKQEKTKAFTCSPYEVISGGDYKQSTYCHLLLGLFFSDHVEFISSAFVYGIVQAFCTFEEVWKDLCNDIKDGTLSSRIKLPKMREAVLGIITPNPSLASKLEASCLELQVVDWFGLVPKLWPNAKYVYSIMTGSMQPYLKKLRHYANGVPLISADYGSTESWIGVNVDLSLPPEKVTFAVVPTFSYFEFIPLYRQKQDCSSVADHDFMEDEPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTVNIDKNTERDLQLVVEKGSQLLNNEAKAELVDFTSYADISNQPGCYVIFWEIKGEAEDKVLEACCREMDAAFVDHGYVVSRKTSSIGPLMLCIVERGTFRKILDYFVENGAALGQFKTPRCTNNPVLLKILSACTIKTFRSTAYSSIHS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03563 612 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 29 607 IPR004993 -
Pumo4g03563 612 Pfam GH3 auxin-responsive promoter 32 587 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03563 Pumo-Chr4 74231153 74237228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03563 28 605 EF-hand Containing Proteins AT1G23160 35.245 6.89e-117 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03563 K14487 - gmx:100814683 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03563 4 74231153 74237228 Pumo4g03563 4 74231153 74237228 ECH
Pumo4g03563 4 74231153 74237228 Pumo11g01113 11 39597841 39602466 PCT