Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01113 ATGCCGCAGCACCAACCAACTCCAATGGAACCTGTTCTCAGCTACAACAATGGCAATAGCAATGGCAACAGTACTAGTGGCTATGATGTCATAAGCTGGTTTGAAGATGTGTCCCAGAACGCTGGTTTTGTTCAGACTCAGTTGCTGTGCCAGATTCTGAAGCAGAACTATGGGGTGGAATATCTCAAGAAATGGTTGGGGAACTACAATATCCTTGAGATGGATGCATGTGCATTGGAATCCCTTTTCTCTTCTGTGGTTCCCCTTGCCTCACATGCTGATTTTGAGCCATTTATTCAACGGATTGCAGATGGGGACACAGCTCCTTTACTCACTCAACAACCCATAACCACTCTTTCCTTAAGTTCTGGAACCACAGAGGGGAGGCAGAAGTTCGTACCCTTTACCCGCCATAGTGCACAAACCACGCTTCAAATATTCACCCTAGCTGCAGCCTATAGATCAAGGGTTTATCCAATAAGGGAAGGTGGAAGGATTCTTGAATTCATATACAGCAGCAACAGGTTCAAAACAAAAGGAGGTTTAACAGTAGGAACAGCCACAACACACTACTATGCTAGTGAAGAATTCAAAATCAAGCAGCATAAGACTAAATCATTTACTTGCAGCCCTCAAGAAGTGATTTCTGGTGGAGACTACAAACAATCCACATATTGCCACCTCCTTCTTGGCCTATACTTCACTGACCAAGTGGAGTTTATAACCTCAGCTTTTGTCTATAGCATGGTGCAAGCCTTCAGCAGTTTTGAGGAACTTTGGAGGGAAATTTGCAATGACATAAGAGATGGCACTCTGAGCTCAAGGATCAAGCCACCCAAAATGAGAAAGGCTGTTTTGGACATCATCTCTCCAAACCCAAATTTGGCCTCAAAGTTAGAAGCTGCTTGCCAGGAGCTAGAAATGGTGGATTGGTTTGGTTTAATTCCTAATCTTTGGCCAAATGCTAAGTATGTGTACTCCATAATGACAGGGTCCATGCAACCATATTTGAAAAAACTTAGGCACTATGCAGATGGGTTGCCTTTGGTTAGTGCTGACTATGGCTCAACTGAGAGCTGGATAGGGGTTAATGTTGACCCTAGTTTACCACCAGAAGATGTAACATTTGCTGTGGTTCCCACTTTCTCTTACTTTGAGTTCATACCACTCCACAGGCATGAAAAAAATTTCAGTTCAGGAGGTGATGATTTCATGGAAGACAAGCCAATTCCACTGTCTCAGATCAAAGTTGGACAAGAGTATGAAGTAGTCCTCACAACTTTCACCGGACTGTACAGGTGCAGATTAGGGGATGTGGTGGAAGTGGCTGGCTTCCACAATGGGACCCCAAAGTTGAACTTTGTGTGCAGAAGAAAGCTAATTCTGACAGTAAATATAGACAAGAACACAGAAAAGGACCTTCAGCTAGTGGTAGAGAGGGGGTCCCACATTCTGAACAAGGCAAGAGCTGAGCTAGTTGATTTCACAAGCTACGCGGATGTCTCAGACCAACCGGGGCACTACGTGATTTACTGGGAGATCAAAGGTGAAGTTGAGGACAAGATCCTTAACGCATGTTGCACCGAAATGGACAAATCCTTCGCGGACCATGGCTATGTGGTGTCCAGAAAAACCAACTCCATAGGGCCCTTGGAGCTTTGCATTTTGGAGAGTGGGACTTTCAAGAAGATCTTGGACAGCTTCATAGCAAATGGGGCAGCACTTAGCCAATTCAAGACCCCCAGGTGCACCAACAACCGTGTCCTCCTGAAAATTCTTAACACGTGCACCACCAGAAAGTTTCGTAGCACAGCTTACAACACCCAAACCAACAATGATTGA 1842 0.4484 MPQHQPTPMEPVLSYNNGNSNGNSTSGYDVISWFEDVSQNAGFVQTQLLCQILKQNYGVEYLKKWLGNYNILEMDACALESLFSSVVPLASHADFEPFIQRIADGDTAPLLTQQPITTLSLSSGTTEGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPIREGGRILEFIYSSNRFKTKGGLTVGTATTHYYASEEFKIKQHKTKSFTCSPQEVISGGDYKQSTYCHLLLGLYFTDQVEFITSAFVYSMVQAFSSFEELWREICNDIRDGTLSSRIKPPKMRKAVLDIISPNPNLASKLEAACQELEMVDWFGLIPNLWPNAKYVYSIMTGSMQPYLKKLRHYADGLPLVSADYGSTESWIGVNVDPSLPPEDVTFAVVPTFSYFEFIPLHRHEKNFSSGGDDFMEDKPIPLSQIKVGQEYEVVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFVCRRKLILTVNIDKNTEKDLQLVVERGSHILNKARAELVDFTSYADVSDQPGHYVIYWEIKGEVEDKILNACCTEMDKSFADHGYVVSRKTNSIGPLELCILESGTFKKILDSFIANGAALSQFKTPRCTNNRVLLKILNTCTTRKFRSTAYNTQTNND 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01113 613 Pfam GH3 auxin-responsive promoter 33 587 IPR004993 -
Pumo11g01113 613 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 29 606 IPR004993 -
Pumo11g01113 613 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01113 Pumo-Chr11 39597841 39602466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01113 24 604 EF-hand Containing Proteins AT1G23160 35.235 2.22e-119 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01113 K14487 - gmx:100792358 1149.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01113 11 39597841 39602466 Pumo11g01113 11 39597841 39602466 ECH
Pumo4g03563 4 74231153 74237228 Pumo11g01113 11 39597841 39602466 PCT