Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03233 ATGCAGCTGCACATATCTCCAAGTCTGAGGCATGTTACTGTGTTTCCAAGCAAAGGGTTCAAGGAGTTTATCAAAGTGAAGGTTGCATCGAGGCGTGTTTCGTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACTTTTCTTCTCCGGGAAGGTTTGATAGTTCCACAGACTCTAGAAGAGTTCATGACTGAAATGAAGAAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTTCGAGAAATGGTAACCCTTATGGAGCAAAGGACCAGGATGGCCAAAATCCAAGAATATCTATACCGACATGTAGCATCAAGCAGCATACCAAAACAACTTCATTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAATGCCGCCGCACGCCTTCAACTCCCCTCTGCAGAACTAGTCCCTGCCCTTGTTGACAACTCCTACTTCCACTTTGTCCTTGCCTCAGACAATGTGCTGGCTGCATCAGTGGTTGCAACATCACTTGTTCGCAACTTTTTGAGACCTGAGAAGGTTGTTCTGCACATAATTACAGACAGGAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCATTCATTATCACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTACCTGTTTTGGAAGCTATGGAGAAAGATCAAAAGGTGAGGTCACAGTTTAGAGGGGGGTCATCAGCTATAGTTGCAAATACCACTGAGAAGCCAAAAGTTATTGCAGCAAAACTTCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCCGGATACATCTCCCAGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGATGATGACATCGTGGTACAAACTGATCTCTCACCTCTGTGGGACATTGAAATGAATGGAAAAGTAAATGGAGCTGTAGAAACATGCAATGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAGAGCTATTTGAACTTCTCCCACCCTCTAATATCCAAAAATTTTAATCCCAATGAATGTGCCTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATATTTACCATTATTGGGTTGAACAGAATATCAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGTTATGTCCACGTTATTGATCCTTTCTGGCATATGCTGGGATTAGGATATCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGGTGTCGTCCATTTCAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCACAACTAAGGAAATTGTGGACAAAGTATGTTGACTTCTCTGATAAGTTCATCAAGAGTTGTCACATTAGGGCATCATAG 1428 0.4237 MQLHISPSLRHVTVFPSKGFKEFIKVKVASRRVSYRMLFYSLLFFTFLLREGLIVPQTLEEFMTEMKKGGYDAKTFAVKLREMVTLMEQRTRMAKIQEYLYRHVASSSIPKQLHCLSLSLANEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNFLRPEKVVLHIITDRKTYYPMQAWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTTEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNIYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGYVHVIDPFWHMLGLGYQENTSFADAESAGVVHFNGRAKPWLEIAFPQLRKLWTKYVDFSDKFIKSCHIRAS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03233 475 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 57 472 IPR029993 GO:0047262
Pumo4g03233 475 SUPERFAMILY Nucleotide-diphospho-sugar transferases 150 472 IPR029044 -
Pumo4g03233 475 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 151 469 IPR029044 -
Pumo4g03233 475 CDD GT8_like_1 149 461 - -
Pumo4g03233 475 Pfam Glycosyl transferase family 8 148 448 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03233 Pumo-Chr4 66654724 66657737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03233 1 475 Glycosyltransferase AT5G54690 71.589 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03233 K20867 - gmx:100812550 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03233 4 66654724 66657737 Pumo4g03233 4 66654724 66657737 ECH
Pumo4g03233 4 66654724 66657737 Pumo11g00893 11 32876340 32878932 PCT