Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03232 ATGATTGAGGGTGAATTTGAGGAACCGTTGATTATTGTTGTGTTGTGGGTAGGTGCTATTTTGGTGTGTTTGGTGATGGGGATGAGGAATGATGCACAGAAGCAACAGCTTCTTCATCAGGGTAATGGTGGTGGTGGCAAAACCAACGGCTTCATTCCTAGTTCTTTCCGTGCTCTCTCTAGCTACCTGAGAATTGTTTCCTCAGGTGCTTCCACTGTTGCACGTTCTGCTGCATCGGTTGCTTCATCGATTGTGGAGAGGGATGATGACCCTGACCATGATCAGGTTATCTGGGCTGGGTTTGACAAGTTAGAGGGTGAGGGTGAAGTTATTCAGCAAGTACTTCTTCTAGGATATCAATCTGGATTCCAGGTTTGGCATGTTGATGAATCAAATAATGTCCGAGACCTGGTTTCCAGACACGATGGTCCTGTTTCTTTTATGCAAATGGTACCTAATCCGATTGCATCAAAGAGATCAGAAGACAAGTATGCAAACAGCCGCCAACTGTTAGTTGTTTGTACTGATGGGTTCTTTGCTGGAGGTAGCAATGTTCAGGATGGGTTGACCACCCCTTACAATGGGAGCACTTCAAACTCCCATGACCAAATAAATGGAAACTATCTGCCAACTACCGTTAGGTTTTATTCTATGAAATCCCAATCATACGTTCATGTACTGAAGTTTAGATCAGTTGTTTATTCTGTGAGGTGCAGTTCTCGAGTAATTGCGGTTTCTCAGTCCACTCAGATACACTGTTTTTTTGCTACCACATTAGAAAGGGAATATACTTTACTTACCAATCCTATAGTAATGAGTTGCCCTGGTTCTGGAGGCATAGGTTATGGACCACTTGCGGTGGGACCAAGATGGCTTGCTTATAGTGGAAGTCCAGTTGCAATCTCCAATTCAGGACATGTCTGTCCACAACATTTGACACCTTCTGCAAGCTTTCCTGGTTTTTCTTCTAATGGGAGCTTGATTGCACACTATGCCAAAGAGTCCAGCAAGCATCTTGCTTCTGGGATTGTGACCCTTGGAGACATGGGGTATAAGAAAATCTCCAGATACTGCTCTGATACCAATGGTTCATTACAATCTGTAAATTCTGGCTCTAAGGGCAATGGAACCATTAATGGCCATTCAACAGATGCAGATAACATTGGAATGGTTATTGTTAAAGATATTGTCTCAAAAAATGTTATTGCCCAATTCCGGGCCCACAAGAGTCCTATTTCAGCATTGTGCTTTGATCCTAGTGGCACCATATTAGTGACAGCTTCCATTCAGGGTCATAATATAAATGTTTTCAAGATAATGCCTGCACATGAGAATTTGTCAGCATCTGATACTGGTCCTTCTTATGTTCATTTGTACAGGTTGCAACGTGGCTTAACAAATGCCGTTATACAAGATATCAGTTTCAGCGATGACAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATCTATTTGCCATAAATCCTCAAGGAGGACATGTAAATATTCAGTCTTTTGATGATAGTTTTACCTCAAAAAATAGTGGATTAGGCACTACAACTAATCATGCAGTTCGTCGGTCTCATAGTTCGGCCATGCAAATGCCTAAACAGCAGAGCCTATTTGTTGCTGGTCCTCCAATCACACTTTCTGTCATAAGCAGAATTAGGAATGGAGCTAATGGTTGGAGAGGCACCGTAAGCGGTGCTGCTGCAGCTGCAACTGGTAGGAAAACTGCCCTTTCCGGGGCTATTGCTTCATCTTTCCGTAACTATAAAGGCAATGATAGGAGCTTTTCCAAGTCAAAGTATCACCTGTTGGTCTTTTCACCCACTTGTTCTATGATACAATATGCTCTTAGAACAATAACTGGTCAAGATTCAACTGTTGTTTCTGGATTGTCCCCTGCTTATGAATCCATTCCACAGACTGATACAAGATTAGTAGTAGAGGCTATCCATAAATGGAATATATGTCAGAGTCATAATCGGAGAGAGCGAGAAGATAATGTAGACATATATGGTGAGAATGGAATTTCAGACGTTAATAAAATATATCCAGAGGAAGTGGGGGAGGAGAACACTATTAGCCCTAAAATCAAGAATGGAGTCATGAAAGTGAATCCCTGTCTTGAGGAGGAGCATCATTTGTATATTTCAGAAGCTGAATTGCAAATGCATCAAGCTCAGACTCCATTGTGGGCAAAGCCAGAGATATATTTTCATTCAATGTTGCAAGAGTCTACTATAATGGATGAAGAAGCTGCTTCAGGAGGTGAATTTGAGATTGAAAGGATTCCAACTTGCACGATTGAAGCTAGATCAAAAGACTTGGTTCCGATTTTTGACTATATTCATGCCCCGAAATTACAACAAACAAGGACTCCTGCTGTGGATAGCAAGACAAATGAACAACTGTTGCATCGCAATTCTTGGCCGTCCGGAAACGGCAGGATTTCACCTAGGACTATTTTGGGATCTCCTGAGTGTGTGGCAAATCCTGGTGATGCTGTTGGTGAATTTAAAACTGGGATTGAAGGAACTGAGTGGGAAAATCATGTGGTGCCTTCTGAAACTGTGAGCTTTGTAAATAACAATGACACCTTTAAACCAAATAGTCAGCATGAGATTGTAAATAATAGAATGGAGCACTTAAACACCGGGGCTCAACTCATGTTTGTAAATAGTGACAGAAAGCCTGAAAATGAAGAATCATTTTGA 2727 0.4177 MIEGEFEEPLIIVVLWVGAILVCLVMGMRNDAQKQQLLHQGNGGGGKTNGFIPSSFRALSSYLRIVSSGASTVARSAASVASSIVERDDDPDHDQVIWAGFDKLEGEGEVIQQVLLLGYQSGFQVWHVDESNNVRDLVSRHDGPVSFMQMVPNPIASKRSEDKYANSRQLLVVCTDGFFAGGSNVQDGLTTPYNGSTSNSHDQINGNYLPTTVRFYSMKSQSYVHVLKFRSVVYSVRCSSRVIAVSQSTQIHCFFATTLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPVAISNSGHVCPQHLTPSASFPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKISRYCSDTNGSLQSVNSGSKGNGTINGHSTDADNIGMVIVKDIVSKNVIAQFRAHKSPISALCFDPSGTILVTASIQGHNINVFKIMPAHENLSASDTGPSYVHLYRLQRGLTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGHVNIQSFDDSFTSKNSGLGTTTNHAVRRSHSSAMQMPKQQSLFVAGPPITLSVISRIRNGANGWRGTVSGAAAAATGRKTALSGAIASSFRNYKGNDRSFSKSKYHLLVFSPTCSMIQYALRTITGQDSTVVSGLSPAYESIPQTDTRLVVEAIHKWNICQSHNRREREDNVDIYGENGISDVNKIYPEEVGEENTISPKIKNGVMKVNPCLEEEHHLYISEAELQMHQAQTPLWAKPEIYFHSMLQESTIMDEEAASGGEFEIERIPTCTIEARSKDLVPIFDYIHAPKLQQTRTPAVDSKTNEQLLHRNSWPSGNGRISPRTILGSPECVANPGDAVGEFKTGIEGTEWENHVVPSETVSFVNNNDTFKPNSQHEIVNNRMEHLNTGAQLMFVNSDRKPENEESF 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03232 908 MobiDBLite consensus disorder prediction 795 821 - -
Pumo4g03232 908 SMART WD40_4 454 495 IPR001680 GO:0005515
Pumo4g03232 908 SMART WD40_4 398 438 IPR001680 GO:0005515
Pumo4g03232 908 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 44 881 IPR045142 GO:0006914
Pumo4g03232 908 FunFam Breast carcinoma-amplified sequence 3 321 547 - -
Pumo4g03232 908 SUPERFAMILY WD40 repeat-like 114 497 IPR036322 GO:0005515
Pumo4g03232 908 Pfam Breast carcinoma amplified sequence 3 547 782 IPR022175 -
Pumo4g03232 908 Gene3D - 107 534 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03232 Pumo-Chr4 66639435 66645547 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03232 - - gmx:100784596 1586.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03232 4 66639435 66645547 Pumo4g03232 4 66639435 66645547 ECH
Pumo4g03232 4 66639435 66645547 Pumo11g00895 11 32888684 32892732 PCT