Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02220 ATGACTGCTTCAACTCAATTTGCTGCCACTTTGGTCGTCCTATTTTTCTCTCACTTTCTAAGAGGGTCCAATTCAGCAACATTCACAATCGTAAACAAATGTAGCTACCCAGTTTGGCCCGGGATTTTGTCCGGCGCCGGAACAGCACAACTCGCCACCACCGGCTTCGCCCTGCAACCCGGCGAGTCCAACGCGGTCGCGGTCCCCACCGCCTGGTCCGGCCGCCTGTGGGGCCGGACCCTGTGCTCCACGGACTCCGCCGGAAAATTCTCCTGCATCACCGGCGACTGCGGCTCCTCCGCCGTGGAATGCGGCGGCGGAGGCGCCTCTCCGCCGGCGACACTGGCGGAGTTCACCTTGAACGGCGCGGGGGGACTGGACTTCTACGACGTCAGCGTGGTGGACGGCTACAACCTCCCCATGCTGGTGGAGGCGCGCGGCGGCGCAGGGAACTGCACGGCGACGGGTGGACCTTATGCGACGCCTCAGACATGCAAGCCAAGCTCATACTCGCAGTTGTTCAAGAGCGCGTGCCCACGCGCTTATAGTTATGCCTACGATGATGCCACCAGTACCTTCACCTGTGCTTCCAGTTCCGCGGATTACCGCATCACTTTCTGTCCCTCATCAACCAAAAGTTCGATCAAGTCAGGGAATGGGAAATTCCCAGTAGCAGTAGATATATCAGTTGGCCACGCCAATGCTGACAAGTCAGCCAAGGTGATGCTAGTGGCTATTGGGGCTGTTTTATTAAGCAATTTGGTGGTTAATGGGAATTTAGTCCCTTAA 789 0.5754 MTASTQFAATLVVLFFSHFLRGSNSATFTIVNKCSYPVWPGILSGAGTAQLATTGFALQPGESNAVAVPTAWSGRLWGRTLCSTDSAGKFSCITGDCGSSAVECGGGGASPPATLAEFTLNGAGGLDFYDVSVVDGYNLPMLVEARGGAGNCTATGGPYATPQTCKPSSYSQLFKSACPRAYSYAYDDATSTFTCASSSADYRITFCPSSTKSSIKSGNGKFPVAVDISVGHANADKSAKVMLVAIGAVLLSNLVVNGNLVP 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02220 262 PANTHER OS03G0233200 PROTEIN 157 208 IPR001938 -
Pumo4g02220 262 PIRSF PR5 1 158 IPR001938 -
Pumo4g02220 262 PIRSF PR5 153 249 IPR001938 -
Pumo4g02220 262 CDD TLP-PA 27 207 - -
Pumo4g02220 262 Gene3D Thaumatin 26 155 IPR037176 -
Pumo4g02220 262 Pfam Thaumatin family 32 152 IPR001938 -
Pumo4g02220 262 Pfam Thaumatin family 157 208 IPR001938 -
Pumo4g02220 262 Gene3D Thaumatin 156 208 IPR037176 -
Pumo4g02220 262 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Pumo4g02220 262 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Pumo4g02220 262 PRINTS Pathogenesis-related protein signature 198 207 IPR001938 -
Pumo4g02220 262 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Pumo4g02220 262 ProSiteProfiles Thaumatin family profile. 25 208 IPR001938 -
Pumo4g02220 262 SMART tha2 28 208 IPR001938 -
Pumo4g02220 262 SUPERFAMILY Osmotin, thaumatin-like protein 26 209 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02220 Pumo-Chr4 32707983 32710407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02220 7 213 Receptor kinase-like Gene Family AT5G38280 45.238 7.84e-65 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02220 - - gmx:100809419 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02220 4 32707983 32710407 Pumo4g02220 4 32707983 32710407 ECH
Pumo11g01936 11 51200096 51227336 Pumo4g02220 4 32707983 32710407 ECH