Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01958 ATGCGTGACTCTTTTTGTTTCATTCAGAATCAAAGCCAAGTGGTGGTGGTAGTTCTTGTGGCACTTTGCCTTGTTAATTGCTCGTCCAGCCTCAAGTTGGGAGAAACTTGTGATTCTGAGAACAAATGTGACGGTGGTCTTCTTTGTGCAACATGCCCTGCAAATGGGAATACCCGCTCTAGATGCACCAGGACCCAACCTATAAGCCCTACTTCCAAGGTGAAAGGTTTGCCGTTCAATCGGTATTCATGGCTGACAACACATAACTCATTTGCTCAAACTGGCGTCAAATCCGACACGGGATCTTTTATTATAACCTCCACAACCCAGGAAGACACGGTTGCCCAACAACTCAATAATGGTGTTCGAGGCCTTATGTTAGATATGTATGACTTTGAAAACGATATCTGGTTGTGTCACTCATTTGCAGGAAAATGTTACGATGTCACTTCGTTTAAACCTGCTATAAACTTGCTTAGAGACATCCAATCATTTATGGAAGCAAATCCATCAGAAATTGTGACCATCTTCATTGAAGACTATGTGGCATCTCCCCAGGGGCTTACCAAGGTGTTTGATGCTTCTGGGCTAAGAAAGTACTGGTTCCCAGTGTCTAGAATGCCTAAAAATGGTGAAGATTGGCCAACCGTTGATGACATGGTTCAGCAGAATCAACGCTTGGTCGTTTTCACCTCTAAATCATCTAAAGAAGACTCTGAGGGCATTGCTTACCAGTGGAAATATGTGGTAGAAAACCAATATGGAAACAATGGAATGAAAGATGGTTCTTGTCCAAATCGTGGCGAATCATCAGCTATGAACACAAAATCAAGGTCATTGGTTTTGATGAACTATTTTCTCACTAGTGCTAATGCAAGTTCAGCTTGTGTTGACAATTCGGCTCCATTAGTTAGCATGCTGAAGACTTGTCATGATGCTGCTAGCGACCGGTGGCCAAATTTCATTACTGTTGATTTTTACCAGAGGAGTGATGGTGGAGGAGCCCCTGAAGCAGTAGACATAGCAAATGGTCATTTAACTTGCGGATGTGACAACATTGCCTATTGCAAGCCAAATGCCACATATGGAGCATGTGATGTGCCTCCGATTTCTCCACCACCACCTGCGGCTGCTCCCCCAACCATTGTGGTGGAAGAAGGAAACCATCAGGCGCCGGAGCAAGAAAAAACTCATGTGGACACCCCTCTCAAGCTGCTGCAATTTTTATGGGTAATGTGTGGAATGACCACTTTCTTGACTTGGCTCTAA 1269 0.4413 MRDSFCFIQNQSQVVVVVLVALCLVNCSSSLKLGETCDSENKCDGGLLCATCPANGNTRSRCTRTQPISPTSKVKGLPFNRYSWLTTHNSFAQTGVKSDTGSFIITSTTQEDTVAQQLNNGVRGLMLDMYDFENDIWLCHSFAGKCYDVTSFKPAINLLRDIQSFMEANPSEIVTIFIEDYVASPQGLTKVFDASGLRKYWFPVSRMPKNGEDWPTVDDMVQQNQRLVVFTSKSSKEDSEGIAYQWKYVVENQYGNNGMKDGSCPNRGESSAMNTKSRSLVLMNYFLTSANASSACVDNSAPLVSMLKTCHDAASDRWPNFITVDFYQRSDGGGAPEAVDIANGHLTCGCDNIAYCKPNATYGACDVPPISPPPPAAAPPTIVVEEGNHQAPEQEKTHVDTPLKLLQFLWVMCGMTTFLTWL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01958 422 SUPERFAMILY PLC-like phosphodiesterases 76 344 IPR017946 GO:0006629|GO:0008081
Pumo4g01958 422 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 78 186 - -
Pumo4g01958 422 Gene3D Phosphatidylinositol (PI) phosphodiesterase 69 334 IPR017946 GO:0006629|GO:0008081
Pumo4g01958 422 PANTHER UNCHARACTERIZED 41 357 - -
Pumo4g01958 422 CDD PI-PLCc_At5g67130_like 69 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01958 Pumo-Chr4 26653578 26664630 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01958 - - gmx:100809640 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01771 11 49266455 49268326 Pumo4g01958 4 26653578 26664630 ECH
Pumo4g01958 4 26653578 26664630 Pumo4g01958 4 26653578 26664630 ECH