Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo11g01771 ATGGCTGTTCTTACACCTTTAAGTTCATGCTTTGGAGCAAAGTATCAGGCTCTAGCACCATTGAGAATTTTAAGGGGTCTGGTGTGTCTACTGGTGCTTCTTTCAACAGCATTTATAATGTTAGTGTTCTTTGGCTTTACAAGTGCTGTTATAGTGCGACTTGTTAGCATCAGTTACAGCAGGAGAGCAACTTCCTTTTTCTTTGGTGCTTGGCTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCAAGAGAACGGATCTTATTGATTGCAAATCATAGAACTGAGGTTGACTGGATGTATTTATGGGACCTTGCCTTGCGGAAGGGATGCCTTGGATACATAAAATATATACTTAAGAGCAGCTTGATGAGACTCCCAGTTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGGAAAGAAAGTGGGAGGCTGATGAGTCAATCATGCGCCATATGCTTTCAACATTCAAGGATCCACAGGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTTACTGAGCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAACATGGGTTACCGGTTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGCTTCTGTGCCTGCTTGCAAGAGTTGAGGGGCTCTCTCACTGCAGTTTATGATGTGACCATTGGCTACAAATACCGCTGCCCATCTTTCTTGGATAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATATTCATATCCACCGCTTCCCCCTTGATACTATCCCGGTATCTGAAGACGAAATGGCCATGTGGTTGGTAAATAGATTCCAGACGAAGGATCAGTTACTTTCCAATTTTCAAACTCAAGGTCAGTTTCCGGATCAAGCAACAGAAAGGGACCTCTCTGCTGTTAAGAGCATTTTAAATTGTATGACAGTTGTTACAGTGACAGGCACATGCATGTACTACAGTTTTTCCTCTGTCTGGTTTAAACTTTATGTGTCTCTAGTCTGTGCTTATTTGGTTCCGGCCACATATTTCAACATTCGGCAGCAGCCCATTCTTAGCTTTTTGAAGATGAGAGCAAGGTAG 1128 0.4238 MAVLTPLSSCFGAKYQALAPLRILRGLVCLLVLLSTAFIMLVFFGFTSAVIVRLVSISYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPVFGWAFHILEFIPVERKWEADESIMRHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHGLPVLKNVLLPKTKGFCACLQELRGSLTAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHIHRFPLDTIPVSEDEMAMWLVNRFQTKDQLLSNFQTQGQFPDQATERDLSAVKSILNCMTVVTVTGTCMYYSFSSVWFKLYVSLVCAYLVPATYFNIRQQPILSFLKMRAR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo11g01771 375 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Pumo11g01771 375 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 31 244 - -
Pumo11g01771 375 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 18 354 - -
Pumo11g01771 375 CDD LPLAT_LCLAT1-like 76 266 - -
Pumo11g01771 375 SMART plsc_2 100 214 IPR002123 GO:0016746
Pumo11g01771 375 Pfam Acyltransferase C-terminus 254 322 IPR032098 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo11g01771 Pumo-Chr11 49266455 49268326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo11g01771 14 365 Miscellaneous Gene Families AT1G75020 61.473 6.08e-162 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo11g01771 K13513 - gmx:100814885 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo11g01771 11 49266455 49268326 Pumo11g01771 11 49266455 49268326 ECH
Pumo11g01771 11 49266455 49268326 Pumo4g01958 4 26653578 26664630 ECH