Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01753 ATGTACAAAGAACGAGATCGAGGTGCTGTTTCTGTTTCTGTTTCCGCCTCCAAATCGGAGGATCGTAAGCGAATCAACGACGTTCTCGATAAGCACTTGGAACGATCCTCTCCTTCCACTTCTCGTCCCATCAACCCCGCCTCCAAAAATTCCAACCTCCAAGCGGAGGAATCTGAAACGGAGAGTGAAGAGTCTGATGTTAGTGGTTCTGACGGGGATGACACCTCTTGGATCTCATGGTTCTGTAATCTCAGAGGGAATGAGTTTTTTTGTGAGGTGGATGATGATTACATCCAGGATGACTTTAACCTATGTGGATTGAGCAGTCAAGTGCCCTACTATGATTATGCCCTTGATTTGATTCTCGATGTTGAATCATCCCATGGTGACATTTTCACAGAGGAACAGAATGAGTTAATTGAATCAGCAGCAGAAATGCTTTACGGTCTGATTCATGCCCGATATGTATTAACCAGCAAAGGAATGGCTGCCATGCTTGACAAATACAAGAACTATGATTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAGCCCTGTCTTCCGGTTGGTCAATCGGACATTCCTAGGTCAAGTACTGTGAAGATATACTGCCCTAGGTGTGAAGATCTTTACTATCCACGCTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACTTATGGACAGCTGAAGCCACAAAAACCATCACAAGGCTATGTTCCGAGAGTTTTTGGGTTCAAAGTTCACAAGCCATAA 792 0.4432 MYKERDRGAVSVSVSASKSEDRKRINDVLDKHLERSSPSTSRPINPASKNSNLQAEESETESEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDIFTEEQNELIESAAEMLYGLIHARYVLTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQGYVPRVFGFKVHKP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 223 240 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 148 169 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 195 216 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 76 92 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 173 194 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 PRINTS Casein kinase II regulatory subunit family signature 93 107 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 MobiDBLite consensus disorder prediction 38 55 - -
Pumo4g01753 263 SMART CK_II_beta_2 76 259 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 Pfam Casein kinase II regulatory subunit 76 259 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 MobiDBLite consensus disorder prediction 17 37 - -
Pumo4g01753 263 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 69 173 IPR016149 GO:0005956|GO:0019887
Pumo4g01753 263 SUPERFAMILY Casein kinase II beta subunit 74 262 IPR035991 GO:0005956|GO:0019887
Pumo4g01753 263 Gene3D - 174 248 - -
Pumo4g01753 263 PANTHER CASEIN KINASE II SUBUNIT BETA 55 262 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 FunFam Casein kinase II subunit beta 174 248 - -
Pumo4g01753 263 ProSitePatterns Casein kinase II regulatory subunit signature. 177 208 IPR000704 GO:0005956|GO:0019887
Pumo4g01753 263 FunFam Casein kinase II subunit beta 69 173 - -
Pumo4g01753 263 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01753 Pumo-Chr4 23086420 23089480 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01753 K03115 - gmx:100793573 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01753 4 23086420 23089480 Pumo4g01753 4 23086420 23089480 ECH
Pumo8g02129 8 58317629 58321074 Pumo4g01753 4 23086420 23089480 PCT