Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01751 ATGAATGATTACAAAGGAAGAGAAGGAGAAAGTGTTGTTGTTCGGAAGCAAATTAAGGAGAAGCAACAACAACCACCCTGTCCTTCCACAACCACAAGGCAAATCAACCAACAACACCGTCGCTCTGCTTCCCTCCCTAACACTCAATACGAGGAATCTGAAACAGATATCGAAGAATCTGATGTTAGTGTTTCAGAAGGGGATGACACATCTTGGATCTCATGGTTTTGCAATTTGAGAGGGAATGAATTCTTTTGCGAAGTTGATGATGATTTCGTGCAAGATGATTTCAACCTCTGTGGATTAAGTAGTCAAGTGCCTTACTATGATTATGCACTTGATTTAATTTTGGATATTGAGTCCTCCCACGACATGTTCACAGAGGAACAAAATGAGTTAATTGAATCTGCAGCAGAGATGCTTTATGGTCTGATTCATGCCCGGTACATTTTGACAAGCAAAGGAATGGCTGCAATGCTTCACAAGTACAAAAACTACGACTTTGGCAGATGTCCAAGAGTTTTCTGCTCTGGACAATCCTGCCTTCCAGTTGGTCAATCAGATGTTCCTAGGTCAAGTACTGTAAAAATATATTGCCCCAGGTGTGAAGACATTTACTACCCAAAGTCCAAGTATCAAGGTAGTATCCTTTGA 654 0.4098 MNDYKGREGESVVVRKQIKEKQQQPPCPSTTTRQINQQHRRSASLPNTQYEESETDIEESDVSVSEGDDTSWISWFCNLRGNEFFCEVDDDFVQDDFNLCGLSSQVPYYDYALDLILDIESSHDMFTEEQNELIESAAEMLYGLIHARYILTSKGMAAMLHKYKNYDFGRCPRVFCSGQSCLPVGQSDVPRSSTVKIYCPRCEDIYYPKSKYQGSIL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01751 217 PANTHER CASEIN KINASE II SUBUNIT BETA 50 216 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 MobiDBLite consensus disorder prediction 22 51 - -
Pumo4g01751 217 MobiDBLite consensus disorder prediction 1 17 - -
Pumo4g01751 217 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 64 167 IPR016149 GO:0005956|GO:0019887
Pumo4g01751 217 ProSitePatterns Casein kinase II regulatory subunit signature. 171 202 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 MobiDBLite consensus disorder prediction 1 65 - -
Pumo4g01751 217 FunFam Casein kinase II subunit beta 64 167 - -
Pumo4g01751 217 PRINTS Casein kinase II regulatory subunit family signature 88 102 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 PRINTS Casein kinase II regulatory subunit family signature 167 188 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 PRINTS Casein kinase II regulatory subunit family signature 71 87 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 PRINTS Casein kinase II regulatory subunit family signature 142 163 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 PRINTS Casein kinase II regulatory subunit family signature 189 210 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 Gene3D - 168 216 - -
Pumo4g01751 217 FunFam Casein kinase II subunit beta 168 216 - -
Pumo4g01751 217 SUPERFAMILY Casein kinase II beta subunit 69 213 IPR035991 GO:0005956|GO:0019887
Pumo4g01751 217 Pfam Casein kinase II regulatory subunit 71 214 IPR000704 GO:0005956|GO:0019887
Pumo4g01751 217 SMART CK_II_beta_2 71 213 IPR000704 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01751 Pumo-Chr4 23043688 23045892 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01751 K03115 - gmx:100789357 400.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01751 4 23043688 23045892 Pumo8g02129 8 58317629 58321074 PCT