Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01747 ATGGGCTGTTTCAACTCTAAGTCAGCGAGGCAGTTTCCTGCACAAGAGAATACTGTTAATCTTGCAGCAGAGACAGCTTTTACTGTCAGTGAGGTTGAAGCACTGTTTGAGCTTTTTAGGAGCATCAGCAGTTCTGTTGTTGATGATGGACTGATAAGCAAGGAAGAATTTCAATTGGCAATCTTCAAAAACAGGAGAAAGGAGAACCTCTTTGCAAATCGGATCTTTGATTTATTTGATGTCAAGAAGAAGGGAGTCATTGACTTCGAAGACTTTGTCAGATCTCTCAATGTTTTCCACCCAAATGCATCATTAGAAGACAAAATAGCTTTTTCATTTAGGCTCTATGATGTGCACAATACTGGCTTTATAGAGCGCCGTGAGGTCAAGCAAATGCTAATTGCACTTCTTTTTGAGTCGGAAATGAAGTTGGCAGATGAGGTCATAGAAACAATTCTTGACAAGACTTTCGTGGAAGCTGACCTAAAGCAAGATGGGAAAATCGACATTGAAGAGTGGGAAAGTTTTGTTTCTAAGAATCCGTCACTACTAAAAATCATGACCCTACCTTATCTGAGGGACATAACAACATCTTTCCCAAGTTTTATTTTTAACTCTAACGTGGATGAAATTGCTGCATAA 642 0.3925 MGCFNSKSARQFPAQENTVNLAAETAFTVSEVEALFELFRSISSSVVDDGLISKEEFQLAIFKNRRKENLFANRIFDLFDVKKKGVIDFEDFVRSLNVFHPNASLEDKIAFSFRLYDVHNTGFIERREVKQMLIALLFESEMKLADEVIETILDKTFVEADLKQDGKIDIEEWESFVSKNPSLLKIMTLPYLRDITTSFPSFIFNSNVDEIAA 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01747 213 FunFam calcineurin B-like protein 3 17 210 - -
Pumo4g01747 213 Gene3D - 18 211 - -
Pumo4g01747 213 PRINTS Recoverin family signature 122 140 - -
Pumo4g01747 213 PRINTS Recoverin family signature 75 96 - -
Pumo4g01747 213 PRINTS Recoverin family signature 168 188 - -
Pumo4g01747 213 ProSiteProfiles EF-hand calcium-binding domain profile. 67 102 IPR002048 GO:0005509
Pumo4g01747 213 ProSiteProfiles EF-hand calcium-binding domain profile. 104 139 IPR002048 GO:0005509
Pumo4g01747 213 SMART efh_1 108 136 IPR002048 GO:0005509
Pumo4g01747 213 SMART efh_1 152 180 IPR002048 GO:0005509
Pumo4g01747 213 SMART efh_1 71 99 IPR002048 GO:0005509
Pumo4g01747 213 SUPERFAMILY EF-hand 21 202 IPR011992 -
Pumo4g01747 213 Pfam EF-hand domain pair 107 176 IPR002048 GO:0005509
Pumo4g01747 213 ProSiteProfiles EF-hand calcium-binding domain profile. 148 183 IPR002048 GO:0005509
Pumo4g01747 213 PANTHER CALCINEURIN B 2 210 IPR045198 GO:0005509|GO:0019722|GO:0019900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01747 Pumo-Chr4 23021038 23025603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01747 1 213 EF-hand Containing Proteins AT4G17615 78.404 2.01e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01747 K06268 - gmx:100527380 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02131 8 58337066 58340099 Pumo4g01747 4 23021038 23025603 PCT