Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01636 ATGGATCATCGCAAACCATTGTTACCCATTTCCTCTGATGACGCTCCAAATCCACGCACTCGCAAGGACCTTCTTCTCGTCGTTTTCGGTTTGCTCTTACTCTCTTCCCTTGTTGCCTTTGGGGGGTACAGGGCCTCCAACGTGGCATCGCCAACATCGAACCATGAACAACATAGTCTCAAATCGGTGCCTTCTTCGAAATGGTACCCGGTTTCGCGCGGTGTTTCTTCGGGGGTGTCGGAGAAGTCATCAAGCATGTTATTCGCGGTCAAAGATGGAGCTTCAGAAGCATTTCCCTGGGACAATAGCATGTTGTCGTGGCAGAGAACTGCTTTTCATTTCCAACCAGACAAAAACTGGATGAATGGTCCTATGTACTACAAGGGATGGTATCACTTTTTCTACCAATACAATCCTAACGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCGGTGTCAAAGGACATGATCCATTGGCTTCACCTTCCACTGGCAATGGTGGCTGATCAATGGTATGACATGCAAGGTGTGTGGACAGGCTCTGCCACAATCTTACCCAATGGTGAAATCATCATGTTGTACACAGGTTCCACCAACGAGTCAGTGCAAGTTCAAAACCTTGCATACCCTGCAGACCCCTCTGACCCTCTTCTTGTGGATTGGATCAAATACCCTGGGAACCCAGTTTTGGTGCCACCACCAGGCACTGGTGCCAAGGACTTTCGTGACCCAACAACTGCATGGCTCACCTCTGAAGGGAAGTGGCGCATCACCATAGGGTCCAAGCTCAACAAAACTGGCATTGCATTGGTTTATGACACCGAGGACTTCAAGACCTATGAGCTTAAGGAGGGGCTGCTCCGTGCTGTCCCTGGCACTGGCATGTGGGAGTGTGTAGACTTCTTCCCTGTGTCTAAGAAGAATGAAAATGGATTGGACACCTCTGTCAATGGGGCTGAGGTGAAGCATGTCATGAAGGTGAGCCTGGATGATGATAGACATGATTACTATGCAATTGGGACCTATGATGAGGAGAAAGTTTTGTTCACACCAGATGATGCTAAGAATGATGTTGGTGTTGGATTGAGGTATGACTATGGTATATTCTATGCATCCAAGACATTTTATGATCATAATAAGGAGAGGAGAGTTTTGTGGGGTTGGATTGGAGAGTCTGACAGTGAATATGCTGATGTGGCCAAAGGTTGGGCTTCAGTTCAGAGTATTCCTAGAACTGTGGAGCTTGATAGGAAGACTGGCAGCAACTTACTTCAGTGGCCTGTTGCTGAGATCGAGAGTTTGAGATTGAGAAGTGATGAATTCACAAATTTGAAGGCTAAACCAGGGTCAGTGGTGTCCGTAGATATTGAAACAGCCACACAGTTGGACATTGTTGCCGAGTTTGAGATAGACAAGGAAACCCTTGAGAAAACACCTGAATCCAACGAGGAATACACGTGCAGCACCAGTGGTGGATCTAAACAACGTGGTGCCTTAGGACCTTTTGGTCTTTTGGTTTTGGCTGATGAGGGCCTTTTTGAGTATAATCCCCAGTATTTTTTTGTCATTAAAGGAAGCAATGGAAATCTTAAGACTTCCTTTTGCTCTGATCAATCAAGGTCTTCTCAGGCAAATGATGTTCGTAAGCAAATCGTTGGAAGCGCTGTTCCAGTACTTAAAGGCGAAAAGTTTTCCTTGCGGATACTGGTGGACCATTCTATTGTTGAAAGCTTTGCTCAAGGTGGAAGGACATGTGTGACATCTCGGGTTTATCCAACAAAGGCAATCTATGGAGCTGCTAGATTGTTCTTCTTCAACAATGCTACTGCGGCCACTGTGACAGCCTCACTCAAAGTTTGGCAAATGAATTCTGCATTTATACGCCCATTCCACCCTGATCAGAAGAATTAA 1914 0.4634 MDHRKPLLPISSDDAPNPRTRKDLLLVVFGLLLLSSLVAFGGYRASNVASPTSNHEQHSLKSVPSSKWYPVSRGVSSGVSEKSSSMLFAVKDGASEAFPWDNSMLSWQRTAFHFQPDKNWMNGPMYYKGWYHFFYQYNPNGAVWGDIVWGHAVSKDMIHWLHLPLAMVADQWYDMQGVWTGSATILPNGEIIMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPGNPVLVPPPGTGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTEDFKTYELKEGLLRAVPGTGMWECVDFFPVSKKNENGLDTSVNGAEVKHVMKVSLDDDRHDYYAIGTYDEEKVLFTPDDAKNDVGVGLRYDYGIFYASKTFYDHNKERRVLWGWIGESDSEYADVAKGWASVQSIPRTVELDRKTGSNLLQWPVAEIESLRLRSDEFTNLKAKPGSVVSVDIETATQLDIVAEFEIDKETLEKTPESNEEYTCSTSGGSKQRGALGPFGLLVLADEGLFEYNPQYFFVIKGSNGNLKTSFCSDQSRSSQANDVRKQIVGSAVPVLKGEKFSLRILVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFFFNNATAATVTASLKVWQMNSAFIRPFHPDQKN 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01636 637 Gene3D - 440 623 - -
Pumo4g01636 637 CDD GH32_Fruct1-like 119 416 - -
Pumo4g01636 637 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 440 623 - -
Pumo4g01636 637 Gene3D Glycosyl hydrolase domain; family 43 117 439 IPR023296 -
Pumo4g01636 637 SMART glyco_32 113 583 IPR001362 GO:0004553|GO:0005975
Pumo4g01636 637 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 117 440 - -
Pumo4g01636 637 Pfam Beta-fructofuranosidase, N-terminal domain 16 105 IPR021792 GO:0004564
Pumo4g01636 637 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 102 626 - -
Pumo4g01636 637 Pfam Glycosyl hydrolases family 32 N-terminal domain 113 428 IPR013148 -
Pumo4g01636 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 428 627 IPR013320 -
Pumo4g01636 637 Pfam Glycosyl hydrolases family 32 C terminal 431 622 IPR013189 -
Pumo4g01636 637 SUPERFAMILY Arabinanase/levansucrase/invertase 106 429 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01636 Pumo-Chr4 20676449 20681006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01636 3 631 Glycoside Hydrolase AT1G12240 63.441 0.0 819
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01636 K01193 - gmx:100799487 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01636 4 20676449 20681006 Pumo4g01636 4 20676449 20681006 ECH
Pumo8g02222 8 59326976 59331976 Pumo4g01636 4 20676449 20681006 PCT