Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01614 ATGGAGTGGCCAGCATGTACGGATGAGTACGAGAAGCTCGTAATTCGCATGAGCACCCCCAGGGTTGTCATAGACAATGCCGTGTGCTCCACTGCGACCATAGTCAAGGTTGATAGCGCCAGAAAGCATGGGATTCTTTTGGATGCCGTACAAGTGCTCTCTGATCTGAACCTTTCAATTAAGAAGGCCTACATTTCCTCTGATGGCAGGTGGTTCATGGATGTTTTCCATGTAACGGATCAAAACGGAAACAAGCTAACGGATGAGAGCGTTTTAAGTTATATTGAACAGTCACTTGGCAGCATTCCCAATGGGAAAACTAATCACTCAAACGGTCTCACTATCCTTGAATTAACCGGCACGGACCGTGTTGGTCTTCTTTCGGAGGTGTTTGCTGTGCTGGCTGAGCAGCAATGTGATGTGGTTGATGCCAAGGTTTGGACTCACAATGGCCGGATTGCCTCCTTAATCTATGTGAAAGACTGCAATTCTGGGACACTTATTGAGGACTCTCAGAGAATCAGTACCATTGGAGCACGTTTGAGAAATGTTTTAAAGGGTGACAATGATATTAGGAGTGCAAAAACTTCTGTCACTAATGCCGTTGTGCACGCGGAAAGAAGGCTGCACCAAATGATGTACACTGACCGTGATTATCAGAGGAATCCCATTTTCAAGTTCACTTCTGATACCCCAATAGTCACCGTCCAAAATTGGGCAGAAAGGGGTTATTCTGTTGTCAATGTTCAGTGCAAGGATCGAGTTAAGCTTTTGTTTGATGTCGTGTGCAATTTGACAGACATGGAATATGTTGTGTTTCATGCCACTATTAAGACAACAATCGACCAAGCGTATCTGGAGTTTTATATAAGACACAAGGATGGCACCCCAATTAGTTCAGAACCAGAGCGACATCGTGTGATTCAATGCTTGCAAGCTGCAGTGGAGAGAAGGGCATATGAGGGTGTTAGGCTAGAGTTATGCACCGAAGACAGACAGGGACTTCTAGCAGAGGTGATGAGAACTTTCCGAGAGAATGGGCTGAATGTGACAAGGGCGGAGATATCTACCATTGGGGACATGGCATCAAATGTTTTCTATGTCACAGATGCGATAGGATACCCTGCTGATCCAAAAATCGTGGAATCTGTAAGGCAGAAAGTAGGGTTAAGCAATTTAAAAGTGAAGGAGTTGCCATTGGTATGCCATCAGAAAGCAGAAAGGGAAGATCAACCAGTTGGGGTTGGTGGGGCAGTGTTGCTGTGTCTGGGGAGCCTCGTGAGAAGGAATCTATACAATTTAGGGTTGATAAAATCTTGTTCTTAA 1326 0.451 MEWPACTDEYEKLVIRMSTPRVVIDNAVCSTATIVKVDSARKHGILLDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLGSIPNGKTNHSNGLTILELTGTDRVGLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDCNSGTLIEDSQRISTIGARLRNVLKGDNDIRSAKTSVTNAVVHAERRLHQMMYTDRDYQRNPIFKFTSDTPIVTVQNWAERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHKDGTPISSEPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIGDMASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVKELPLVCHQKAEREDQPVGVGGAVLLCLGSLVRRNLYNLGLIKSCS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01614 441 CDD ACT_ACR_3 244 318 - -
Pumo4g01614 441 CDD ACT_ACR_1 32 101 - -
Pumo4g01614 441 SUPERFAMILY ACT-like 111 184 IPR045865 -
Pumo4g01614 441 Pfam ACT domain 114 162 IPR002912 -
Pumo4g01614 441 Pfam ACT domain 325 375 IPR002912 -
Pumo4g01614 441 Gene3D - 113 206 - -
Pumo4g01614 441 CDD ACT_ACR_4 322 393 - -
Pumo4g01614 441 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 1 397 IPR040217 -
Pumo4g01614 441 ProSiteProfiles ACT domain profile. 324 404 IPR002912 -
Pumo4g01614 441 SUPERFAMILY ACT-like 29 100 IPR045865 -
Pumo4g01614 441 ProSiteProfiles ACT domain profile. 34 109 IPR002912 -
Pumo4g01614 441 SUPERFAMILY ACT-like 321 392 IPR045865 -
Pumo4g01614 441 ProSiteProfiles ACT domain profile. 115 196 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01614 Pumo-Chr4 20384752 20388084 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01614 - - gmx:100794729 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00565 5 11361126 11364079 Pumo4g01614 4 20384752 20388084 ECH
Pumo4g01614 4 20384752 20388084 Pumo4g01614 4 20384752 20388084 ECH