Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01544 ATGGGAGAGAGTCCACGAAGCCCAGAAGCGAAGTTGGGGATGCGAGTGGGGGATCTTTGGGATGTTCAGGAGCCACAGTTGAGTCCCACTGAGAAACTCAACGCTTGTTTTGAAAGCATCCCTGTCTCTGCGTTTCCTTTTGATCCTTCAAACCAAGAAATTGAGATTAAATCAGACGCGACCCTAGCAGACGCTGTTAAGATATTGGCGCGACACAACGTTTTCAGCGCACCTGTGGTTGATGTTGACGCGCCTGAAGATGCTAGTTGGATTGACAGATACATCGGAATTGTTGAGTTTGCTGGAATTGTTGTATGGATTTTGCATCAGTCTGAACCTACATCTCCTAGGAGCCCATCTACTCCATCCAGTGCAAGGGCAATTGCAGCTGCAGCTAATGGAGTGAATTTTGCTCTAGAACTTGAAGCCTTAGGCCTTGGATCTGCTGCAACAACTGCAGGAAACTTTTTTGAGGATCTGACTTCTTCTGAACTTTACAAGAATACCAAGGTTGGTGATATTTCAGGGACATTCCGCTGGGCCCCTTTTCTTGCTTTGGAGAGATCAAACTCATTTCTAACCATGCTCTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTTCCTGTGTTGGATTTAGGCTCTGGTACAATTGATAACATTATTACACAATCTGCTGTGATTCATATGCTGGCAGAATGCGCGGGACTTCAGTGGTTCGAAAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCCTGGTAACACAAAATGAGATCATAAAGGTTTATGAGGATGAAGCAGTCCTTCAAGCATTTAAAGTAATGAGGAAAAAGAGGGTTGGAGGGGTGCCAGTAATCGAAAGAGAGAGCAAAAAGGCAGTTGGTAATATCAGTTTGCGAGATGTCCAATTCTTGCTAACTGCACCAGAAATCTATCATGATTATAGAGCTATTACAGTAAAAGACTTCCTAACTGAGGTTAGAAGCTACTTGGAGAAGAATAAAAATGCATCCCCAATGTTAAGTGAATATGTTACATGCAAAAAGGACTGCACAATCAAAGAGTTGATTCAACTGCTTGATCAAGAGAAGATTCATAGGGTCTATGTGGTGGACGATGATGGGGATCTGCAAGGACTAATCACACTAAGAGATATCATCTCAAGGCTAGTACACGAACCCCGCGGCTATTTTGGTGATTTCTTTGATGGTGTTCTACCGCTGCCTGCAAACACCAGAGTTTAA 1248 0.4359 MGESPRSPEAKLGMRVGDLWDVQEPQLSPTEKLNACFESIPVSAFPFDPSNQEIEIKSDATLADAVKILARHNVFSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSTPSSARAIAAAANGVNFALELEALGLGSAATTAGNFFEDLTSSELYKNTKVGDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVLDLGSGTIDNIITQSAVIHMLAECAGLQWFESWGTKKLSEVGLPLVTQNEIIKVYEDEAVLQAFKVMRKKRVGGVPVIERESKKAVGNISLRDVQFLLTAPEIYHDYRAITVKDFLTEVRSYLEKNKNASPMLSEYVTCKKDCTIKELIQLLDQEKIHRVYVVDDDGDLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPANTRV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01544 415 Gene3D - 34 235 IPR046342 -
Pumo4g01544 415 Gene3D - 244 394 IPR046342 -
Pumo4g01544 415 SMART cbs_1 182 231 IPR000644 -
Pumo4g01544 415 SMART cbs_1 344 392 IPR000644 -
Pumo4g01544 415 SMART cbs_1 52 108 IPR000644 -
Pumo4g01544 415 SMART cbs_1 259 308 IPR000644 -
Pumo4g01544 415 ProSiteProfiles CBS domain profile. 341 399 IPR000644 -
Pumo4g01544 415 Pfam CBS domain 54 99 IPR000644 -
Pumo4g01544 415 Pfam CBS domain 341 392 IPR000644 -
Pumo4g01544 415 Pfam CBS domain 259 303 IPR000644 -
Pumo4g01544 415 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 35 391 - -
Pumo4g01544 415 SUPERFAMILY CBS-domain pair 25 231 IPR046342 -
Pumo4g01544 415 SUPERFAMILY CBS-domain pair 246 401 IPR046342 -
Pumo4g01544 415 ProSiteProfiles CBS domain profile. 255 316 IPR000644 -
Pumo4g01544 415 CDD CBS_pair_SF 259 388 - -
Pumo4g01544 415 ProSiteProfiles CBS domain profile. 47 114 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01544 Pumo-Chr4 19337405 19341133 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01544 - - gmx:100812388 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01544 4 19337405 19341133 Pumo4g01544 4 19337405 19341133 ECH
Pumo4g01544 4 19337405 19341133 Pumo10g01889 10 24922848 24925990 PCT