Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pumo10g01889 | ATGTCAGCATTGGAGTTAGAGAGAGAAATGGTGACAATGGAAGAGAGTCCAAGGAGCCCAGAGGCGAAGCTGGGGTTGCGAGTGGAGGATCTATGGGACATTCAGGAACCACAGCTGAGTCCTGATGAGAAGCTCAATGCTTGCTTTGAAAGCATACCTGTCTCTGCCTTCCCTCCACCTCCTTCAAATCAAGAAATTGAGATAAAATCAGACGCCACCCTAGCAGAGGCAGTAAAAATACTTGCACAACACAACATTCTCAGTGCACCTGTGGTGGATGTAGATGCACCCGAAGATGCTAGTTGGATTGACAGATATATAGGAATAGTTGAGTTTGCTGGAATTGTTGTATGGATTCTGCATCAGTCTGAACCCACATCTCCTAGGAGTCCATCCAGTGGAGCTGCTAATACAGCTGCAGTTAATGGAATAACTTTTGAAGCATTAGGCCTTGAATCTGCTGCGACAACTTCAGGCAATTTTTTTGAGGATCTGACTTCTTCTCAACTATATAAGAATACCAAGGTTCGTGACATTTCAGGGTCATTCCGCTGGGCTCCATTTCTGGCTTTGGAGAGATCAAACTCATTTTTGACCATGCTTTTGCTGCTTTCCAAGTACAAGATGAAGAGTGTTCCTGTGGTGGACTTAGGTGCAGGTCGAATTGACAACATTATTACACAGTCTTCTGTAATTCACATGTTGGCAGAATGTGCTGGTCTTCAGTGGTTTGAGAGTTGGGGAACCAAGAAACTATCTGAAGTTGGTCTTCCCATGGTGACACCAAATCATATTATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAACTGATGAGGAAAAAGAGGATTGGGGGGTTGCCAGTGATGGAAAGGGGTGGCAGCAGGGCAATTGGTAACATAAGCCTGCAAGATGTTCAATTCCTCCTAACTGCTCCTGAAATCTACCATGATTATAGATCTATTACAGCAAAAGACTTCCTGACAGCCGATAGAAGCTACTTAGAGAAGAATGAAGGGGCCCATCCAATGTCAGGTGACCTTATTACATGCAACAAGGATTGCACAATCAAAGAATTGATTCAACTGCTTGACCGCGAGAAGATTCATCGAGTCTATGTTGCTGACGATGATGGGAATCTTGAAGGACTAATCACGCTCAGAGATATCATCTCAAGGCTAGTACACGAGCCTCGTGGCTATTTTGGTGATTTCTTTGATGGGGTTCTCCCTATGCCTCCAAACAGCAGGGTTTGA | 1263 | 0.4434 | MSALELEREMVTMEESPRSPEAKLGLRVEDLWDIQEPQLSPDEKLNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVKILAQHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSEPTSPRSPSSGAANTAAVNGITFEALGLESAATTSGNFFEDLTSSQLYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGAGRIDNIITQSSVIHMLAECAGLQWFESWGTKKLSEVGLPMVTPNHIIKVYEDEPVLQAFKLMRKKRIGGLPVMERGGSRAIGNISLQDVQFLLTAPEIYHDYRSITAKDFLTADRSYLEKNEGAHPMSGDLITCNKDCTIKELIQLLDREKIHRVYVADDDGNLEGLITLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV | 420 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pumo10g01889 | 420 | Gene3D | - | 249 | 399 | IPR046342 | - | |
| Pumo10g01889 | 420 | CDD | CBS_pair_SF | 201 | 308 | - | - | |
| Pumo10g01889 | 420 | ProSiteProfiles | CBS domain profile. | 61 | 126 | IPR000644 | - | |
| Pumo10g01889 | 420 | Pfam | CBS domain | 265 | 308 | IPR000644 | - | |
| Pumo10g01889 | 420 | Pfam | CBS domain | 346 | 397 | IPR000644 | - | |
| Pumo10g01889 | 420 | SMART | cbs_1 | 64 | 120 | IPR000644 | - | |
| Pumo10g01889 | 420 | SMART | cbs_1 | 264 | 313 | IPR000644 | - | |
| Pumo10g01889 | 420 | SMART | cbs_1 | 187 | 236 | IPR000644 | - | |
| Pumo10g01889 | 420 | SMART | cbs_1 | 349 | 397 | IPR000644 | - | |
| Pumo10g01889 | 420 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
| Pumo10g01889 | 420 | Gene3D | - | 47 | 240 | IPR046342 | - | |
| Pumo10g01889 | 420 | SUPERFAMILY | CBS-domain pair | 259 | 406 | IPR046342 | - | |
| Pumo10g01889 | 420 | CDD | CBS_pair_SF | 264 | 393 | - | - | |
| Pumo10g01889 | 420 | ProSiteProfiles | CBS domain profile. | 259 | 321 | IPR000644 | - | |
| Pumo10g01889 | 420 | ProSiteProfiles | CBS domain profile. | 346 | 404 | IPR000644 | - | |
| Pumo10g01889 | 420 | SUPERFAMILY | CBS-domain pair | 38 | 236 | IPR046342 | - | |
| Pumo10g01889 | 420 | PANTHER | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT | 46 | 396 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pumo10g01889 | Pumo-Chr10 | 24922848 | 24925990 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pumo10g01889 | - | - | gmx:100776754 | 777.704 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pumo10g01889 | 10 | 24922848 | 24925990 | Pumo10g01889 | 10 | 24922848 | 24925990 | ECH | |
| Pumo4g01544 | 4 | 19337405 | 19341133 | Pumo10g01889 | 10 | 24922848 | 24925990 | PCT |