Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01487 ATGGAGCAATTCTGGTCTGGGAGTGCCATCAATGAAAACAAAGGAATGGTAGATAATTTGCAGCGTTATGGAGTAATCACGTCTAGAAAGGTAGGTGAAGTAATGGAAACCATTGATAGAGCTTTGTTTGTACCCAGCAGTGGCGGACTCCAACCTTATGTGGACAGTCCTATGCCGATTGGCTACAATGCCACCATCTCTGCGCCGCATATGCATGCTACCTGCCTTCAGTTGCTGGAGAAGAATTTGCAACCTGGAATGCGAGTTCTTGACGTTGGCTCCGGAACGGGATACCTGACTGCTTGCTTTGCCTTGATGGTTGGACCCCAAGGCCATGCTATTGGTGTGGAACATATTCCTGAATTGGTTTCTTTTTCAATCGAGAATATTCAAAAAAGTGCTGCTGCTCAACCATTGAAAGATGGTTCCCTTTCTGTGCATGTTGGTGATGGAAGGCAAGGTTGGCCTGAGTTTGCTCCTTATGATGCCATTCACGTTGGAGCAGCGGCACCCGAAATCCCCCAACCACTTATTGATCAGTTGAAGCCGGGTGGTAGAATGGTTATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTCGTGGATAAGAACTCTGATGGTTCTATCAGTATCCGGACTGAGACTTCTGTTCGATATGTGCCTCTCACTAGCAGAGAAGCTCAACTGCGAGGTTAG 696 0.4641 MEQFWSGSAINENKGMVDNLQRYGVITSRKVGEVMETIDRALFVPSSGGLQPYVDSPMPIGYNATISAPHMHATCLQLLEKNLQPGMRVLDVGSGTGYLTACFALMVGPQGHAIGVEHIPELVSFSIENIQKSAAAQPLKDGSLSVHVGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISIRTETSVRYVPLTSREAQLRG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01487 231 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 5 229 IPR000682 GO:0004719|GO:0036211
Pumo4g01487 231 Hamap Protein-L-isoaspartate O-methyltransferase [pcm]. 8 228 IPR000682 GO:0004719|GO:0036211
Pumo4g01487 231 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 149 164 IPR000682 GO:0004719|GO:0036211
Pumo4g01487 231 Gene3D Vaccinia Virus protein VP39 5 231 IPR029063 -
Pumo4g01487 231 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 226 - -
Pumo4g01487 231 FunFam Protein-L-isoaspartate O-methyltransferase 4 231 - -
Pumo4g01487 231 NCBIfam protein-L-isoaspartate O-methyltransferase 12 228 IPR000682 GO:0004719|GO:0036211
Pumo4g01487 231 CDD AdoMet_MTases 88 191 - -
Pumo4g01487 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 224 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01487 Pumo-Chr4 18805390 18808213 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01487 K00573 - gmx:100527082 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01487 4 18805390 18808213 Pumo4g01487 4 18805390 18808213 ECH
Pumo4g01487 4 18805390 18808213 Pumo10g01947 10 25675610 25678199 PCT