Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo10g01947 ATGAGGGTGCACTACTACTACTACCCTTTCCCTGCATTGTCGTATGGTTGCAGCTGCTGTTATGCTTATGCAACAAAATTAAAACCCACTCACTCACTCTCTCTAACCCTCTCCAACCACCGTCGCGTTTCTCTCTCACCACAACCTCACTCTTCCACCTTCTCCATCATCACCCACCTCTTCTTCTTCCAAAACCCTAATTTCCTCACAGGGAACACTCTCTTCCTCAGGATGCAGTGCACTCGTACCAAGAGGAGAAAGAAAAGGGAAATGGAAGAAAACCAAGCACGATTTTACTCTGTGAGTGGCATGAGTAAGAACAAAGCAATGGTGGAGAGGTTGCAGCGCTATGGAGTGATCACATCAAGTAAGGTGGCTGAAGTAATGGAGACAGTTGATAGAGCCTTGTTTGTACCTGATGGAGCTGCACCTTATGATGATAGCCCCATGGCCATAGGGTACAATGCCACTATATCTGCACCGCATATGCATGCCATGTGTCTTCAGTTGCTGGAGGAGAATTTGCAGCCTGGGATGCATGCCTTGGACGTTGGCTCTGGAACGGGGTACCTGACTTCGTGCTTTGCCCTGATGGTTGGACCCCAAGGCCGTGCTGTTGGTGTGGAGCATATTCCTGAATTGGTTTCTTTTTCAATAGAGAATATTCAGAAAAGTGCTGCAGCTGCACAATTGAAAGATGGTTCCCTTTCTGTCCATGCTGGTGATGGAAGGCAAGGTTGGCCAGAGTTTGCACCTTATGATGCCATTCACGTTGGAGCAGCAGCACCAGAAATTCCCCAACCACTTATTGACCAGTTGAAGCCTGGAGGTAGAATGGTGATTCCTGTTGGAAACATATTTCAAGATTTAAAGGTGGTGGATAAGAATTCTGATGGTTCTATCAGTGTCCGCACTGAGACGTCGGTTCGATATGTGCCCCTCACTAGTCGAGAAGCTCAACTGCGAGGTTACTAA 975 0.4759 MRVHYYYYPFPALSYGCSCCYAYATKLKPTHSLSLTLSNHRRVSLSPQPHSSTFSIITHLFFFQNPNFLTGNTLFLRMQCTRTKRRKKREMEENQARFYSVSGMSKNKAMVERLQRYGVITSSKVAEVMETVDRALFVPDGAAPYDDSPMAIGYNATISAPHMHAMCLQLLEENLQPGMHALDVGSGTGYLTSCFALMVGPQGRAVGVEHIPELVSFSIENIQKSAAAAQLKDGSLSVHAGDGRQGWPEFAPYDAIHVGAAAPEIPQPLIDQLKPGGRMVIPVGNIFQDLKVVDKNSDGSISVRTETSVRYVPLTSREAQLRGY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo10g01947 324 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 106 318 - -
Pumo10g01947 324 CDD AdoMet_MTases 182 283 - -
Pumo10g01947 324 FunFam Protein-L-isoaspartate O-methyltransferase 99 324 - -
Pumo10g01947 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pumo10g01947 324 NCBIfam protein-L-isoaspartate O-methyltransferase 105 320 IPR000682 GO:0004719|GO:0036211
Pumo10g01947 324 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 97 322 IPR000682 GO:0004719|GO:0036211
Pumo10g01947 324 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 292 IPR029063 -
Pumo10g01947 324 Gene3D Vaccinia Virus protein VP39 101 324 IPR029063 -
Pumo10g01947 324 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 241 256 IPR000682 GO:0004719|GO:0036211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo10g01947 Pumo-Chr10 25675610 25678199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo10g01947 K00573 - gmx:100810913 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo10g01947 10 25675610 25678199 Pumo10g01947 10 25675610 25678199 ECH
Pumo4g01487 4 18805390 18808213 Pumo10g01947 10 25675610 25678199 PCT