Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01466 ATGATGCAAGACTCAATTGGGATTCCTGCATGCTTTTCTTCTTCAGTGGAGAAGCAGCATGGTCATGATGATCATGGAGCTGTGACCCGTTCAGGTCAGAGCGTGTACATGTCTGTGTATAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATCACATGGTGCAAAAACCTCTTGCTTCATGGGCTTTCGGTGTCAGTGGAAGGCCCAGAAGGAGAGGAACAGTACACCTGCAAGGTCGAGCTGAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGCTTCATAGTGGATGGCAAAGCCGTTGACATTTTCTGGGACCTTAAGGCTGCAAAGTTTAACGGCGAGACAGAACCAACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTGCTGCTTCTTGGTGATCTAAAGAAAGAGGCATACAGAAGGACGGGGTGCAGGCCAGCACTTATTGACCCCATTTTGGTTTCAAAGAAAGAGCACATTTTTGGGAAGAAGAAGTTCTCCACTAGAGCCAAGTTTCATGAGAAGGGTAGGTGGCATGAGATTTCAATTGAGTGCAAAAACAAGGGAAATAGTGGGGATTCTCTAAATGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTTAGAGGCAACGAGTCAATTCATCTCAGCAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTTTTTAGTCCTGGTTTAAAGCATGCTTTATTCATTTTTAAGCCAATTTTGTCATCTAGTACTACTAGTACCACTACTTCTATGTCATCTTCCTCACCTTCATTATCATCCTCATCGCCTCCAATATTATCCACTGATCAGACAAGGAGTTCTGGATCAGTGGAGGGATTTAGTGTTAGTGGGTCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAAGTTGAATGA 981 0.4434 MMQDSIGIPACFSSSVEKQHGHDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGNSGDSLNGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSSSTTSTTTSMSSSSPSLSSSSPPILSTDQTRSSGSVEGFSVSGSSEFCLFLYAWKVE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01466 326 MobiDBLite consensus disorder prediction 275 300 - -
Pumo4g01466 326 Pfam Plant protein of unknown function (DUF868) 31 324 IPR008586 -
Pumo4g01466 326 PANTHER EXPRESSED PROTEIN 8 324 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01466 Pumo-Chr4 18553873 18555661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01466 8 326 EF-hand Containing Proteins AT5G28150 36.562 7.52e-71 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01466 - - gmx:100779755 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01466 4 18553873 18555661 Pumo4g01466 4 18553873 18555661 ECH
Pumo4g01466 4 18553873 18555661 Pumo10g01964 10 25908454 25910364 PCT